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The map label for this gene is ccmK [H]

Identifier: 170079207

GI number: 170079207

Start: 2742481

End: 2742816

Strand: Direct

Name: ccmK [H]

Synonym: SYNPCC7002_A2613

Alternate gene names: 170079207

Gene position: 2742481-2742816 (Clockwise)

Preceding gene: 170079206

Following gene: 170079208

Centisome position: 91.17

GC content: 54.46

Gene sequence:

>336_bases
ATGCCCGCTCAAGCTGCGGTTGGATCACTTGAAACAAAAGGCTTTCCCGGAGTACTTGCCGCTGCCGATGCGATGGTTAA
AGCCGGTCGTGTAACCCTGGTGGGTTACATTCGGGTTGGTAGTGCCCGCTTCAATATCAACATTCGTGGCGACGTTTCGG
AAGTCAAAACGGCAATGGCTGCGGGTATTGAAGCCGTTGAGAAAGCCCATGGTGGCGTTTTAGAATCCTGGGTGATTATT
CCCCGTCCCCATCCCAACGTCTGTGCGGTACTGCCCATCGACTACAGCGAAGATGTAGAACCCTACCGGGCCGCCGTAGA
AGGAACCCGCGTTTAA

Upstream 100 bases:

>100_bases
AGATCTTGGTGTTTTGCCCAGTTTAGAGAATAATATGTGCTTGGGTGAAGAACCAAATATGAATAAGTTTTACTAATCAC
AAAGATAAAGGAGACCCCCT

Downstream 100 bases:

>100_bases
ATTAACCTTCTCAAAACCGCAGATTCATCACAGAAAAGCCTATTTCGATGGGCTTTTTTCGTTGTTGGGTCGGGCGACGG
GTGATGTTAAATAGAACCAT

Product: carbon dioxide concentrating mechanism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPAQAAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFNINIRGDVSEVKTAMAAGIEAVEKAHGGVLESWVII
PRPHPNVCAVLPIDYSEDVEPYRAAVEGTRV

Sequences:

>Translated_111_residues
MPAQAAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFNINIRGDVSEVKTAMAAGIEAVEKAHGGVLESWVII
PRPHPNVCAVLPIDYSEDVEPYRAAVEGTRV
>Mature_110_residues
PAQAAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFNINIRGDVSEVKTAMAAGIEAVEKAHGGVLESWVIIP
RPHPNVCAVLPIDYSEDVEPYRAAVEGTRV

Specific function: May be involved in the formation of the carboxysome, a polyhedral inclusion where RuBisCO is sequestered [H]

COG id: COG4577

COG function: function code QC; Carbon dioxide concentrating mechanism/carboxysome shell protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial microcompartments protein family [H]

Homologues:

Organism=Escherichia coli, GI87082108, Length=93, Percent_Identity=41.9354838709677, Blast_Score=60, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020808
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 11629; Mature: 11497

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01139 BACT_MICROCOMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAQAAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFNINIRGDVSEVKTAMA
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHHH
AGIEAVEKAHGGVLESWVIIPRPHPNVCAVLPIDYSEDVEPYRAAVEGTRV
HHHHHHHHHCCCEECCEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure 
PAQAAVGSLETKGFPGVLAAADAMVKAGRVTLVGYIRVGSARFNINIRGDVSEVKTAMA
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEECCEEEEEEECCCHHHHHHHHH
AGIEAVEKAHGGVLESWVIIPRPHPNVCAVLPIDYSEDVEPYRAAVEGTRV
HHHHHHHHHCCCEECCEEEEECCCCCEEEEEECCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231; 9298645 [H]