| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170079042
Identifier: 170079042
GI number: 170079042
Start: 2541556
End: 2543442
Strand: Reverse
Name: 170079042
Synonym: SYNPCC7002_A2447
Alternate gene names: NA
Gene position: 2543442-2541556 (Counterclockwise)
Preceding gene: 170079045
Following gene: 170079041
Centisome position: 84.55
GC content: 54.43
Gene sequence:
>1887_bases ATGGAAACGACGGCGATCGCCAATGGGGATCCAGAGCAAGCAACGGCAGAGACAGAGACAGAAATCCTTGGGGTTCCGCG TAAACGCCAATTTCTTCTCCCCAATTGGCAATGGTTAGGGTTGCTCTTAATTTTCCTATCGGGAGGCGTAGGCTTTTTGG CGACATCGGTTCTCCTGAGTTTTAATGGCAGCAACAATTGCAGTGCCCTGTTCTTGCCTTTAGCCTCCGCCACAACCCGC TTATACTGCGCCCAGATTGAGGCGGAGAAACAGACCCTTGCCAGCTACCTAAAGGCGATTCGGATGGTGAGTGGTTTTTC GGAGAATCACCCCCTCCGGGCGGATATTGACCGCAACATTGAGGTGTGGGTTTCGCAAATTATTGCCCTTGCTGAGGTGG AATTCCAGGCGGGAAAGTTGGATGAGGCGATCGCCATGGTGCGCGATATTCCCGAAAAGGCCGGTTTTCAAGCAGAAATT GAGTCCCAAATCACGGCCTGGGAAGATATTTGGCAAGAGGGAGAAGCGATTCTAGCTAGCCTGCAACGGCAACTCGAAGC AGGAGATTTAAGCCAGGCGATGCGGACAGTCGTCCAACTCAGTTATTTAGACAATCGCTACTGGGCTACGGTGAAGTACG ATGAGGCCATGGCGCAAATTCAGTTGGCTCGCAAGGAAACGGAGCAGCTAGAAGGGGCCTATGCAGCCCTGCGTCGGGGC GGTTTAGAAAATTGGCTCCAGGCGATCGCCCAGGCGAGCAACATTAGCCAAGATAGCTATGCTTACCCCCAAGCTCAACG TTTAATTAGTGACGCCCGCGAAAAAATCATTGACTACACCGACAACATTATTGATGAACGCCGCTGGGATGACTTACTGG CCCTCTGCGATCGCCTACCGGATCAACTGAACCTCGACAACGTGGTGGTCGATTGGCGAATTCTGGCCCAAGCTGGCCTC AGGGCGAACCAAGGAACCGTTAAGGATCTCGAAACAGCCCTGGTGCAAATCCAAAGTATTCAGCCCGCCAGTGCTGTCTA TGACCAGGCCCAAGGTCTGATTAGTCGTTGGCAACGGGAAATTGAGGACGTGGCGATCCTAGAACAGGCTGAGGAATTGG CCCAGGGGGGAAATATCGCCGACTATGAACGGGCGATCGCCCAGCTCAACCGTGTTCCCTCAGGCAACCCCCGTTACGAT GAAGCCCGCCAAAAAATTCGCCAATGGCGTCGCCAAATTGAAATCGCCGAAGACTCTCCCACCCTGGCCTATGCGAAAGA TTTAGCAGCGACCAATCGTCTCCAGGAGGCGATCGCCGAAGCCCGCACGATCCAATCCGGTCGCGCCCTCTACAACGAAG CCCAAGAAAATATTCGTCAGTGGCGCAACACCATTGAACGGACTGAAGATCAGCCGATCTTTGACCGAGCTGTGGCCCTC GGCCAACAAAAACGCTTCGATGAGGCGATCGCCGTTGCTAACCAAATTGCCCCGAACCGTGTCCTTTATGACGAAATGCA GGCTAGGGTCAGGAGTTGGCGTCAAGAACAAACCGCGATCAATAATCTCAATCGCGCCTACCAAGTGGCCAATGGTAACT CCGTCTCTGCCTGGGTAGAAGCCATCAACCTTACCCAAGAAATTCCCAGCAGCGCTAGCCAACTGCGGGCCGAAGGAAAA CAGGCCGCTGACCAATGGAGCTATCGGATCCTCTCTGTGGCCCAGAGCCAAGCCAATATCTCAATCCCCCAGGCGATCGC CACCGCTCGCCAAATCCCCCGCAATACCGCTGCCTACGACGCCGCCCAAACCCAAATCAACACCTGGCAACGTCTCACCA CCCCCAGCCCTAGTCCCCAAACCATCGACGTTCCGACAAACCTCTAA
Upstream 100 bases:
>100_bases CTCGCAAGTGCAATCCGTTTCTTCCGTTGGCACCCAATCGCAGCCAGTGTTATCGACTGAAGCAGGTTTATCGGAAGCGT CTGGGACGCAAGATTTAAGC
Downstream 100 bases:
>100_bases TTTCCCCTTCTTCAGTTGCCCATGACCACCGAACACCCCCTTGGCTCCGTAATTCAAGGTTCCCTCAGCCAAGGCCTCGA AGTCCGTCTCCATGGCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL
Sequences:
>Translated_628_residues METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL >Mature_628_residues METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLSFNGSNNCSALFLPLASATTR LYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNIEVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEI ESQITAWEDIWQEGEAILASLQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLPDQLNLDNVVVDWRILAQAGL RANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQREIEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYD EARQKIRQWRRQIEIAEDSPTLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVEAINLTQEIPSSASQLRAEGK QAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYDAAQTQINTWQRLTTPSPSPQTIDVPTNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 70440; Mature: 70440
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLS CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH FNGSNNCSALFLPLASATTRLYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNI CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEIESQITAWEDIWQEGEAILAS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLP CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DQLNLDNVVVDWRILAQAGLRANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQRE CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYDEARQKIRQWRRQIEIAEDSP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC TLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH AINLTQEIPSSASQLRAEGKQAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH AAQTQINTWQRLTTPSPSPQTIDVPTNL HHHHHHHHHHHHCCCCCCCCEECCCCCC >Mature Secondary Structure METTAIANGDPEQATAETETEILGVPRKRQFLLPNWQWLGLLLIFLSGGVGFLATSVLLS CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH FNGSNNCSALFLPLASATTRLYCAQIEAEKQTLASYLKAIRMVSGFSENHPLRADIDRNI CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH EVWVSQIIALAEVEFQAGKLDEAIAMVRDIPEKAGFQAEIESQITAWEDIWQEGEAILAS HHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH LQRQLEAGDLSQAMRTVVQLSYLDNRYWATVKYDEAMAQIQLARKETEQLEGAYAALRRG HHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLENWLQAIAQASNISQDSYAYPQAQRLISDAREKIIDYTDNIIDERRWDDLLALCDRLP CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DQLNLDNVVVDWRILAQAGLRANQGTVKDLETALVQIQSIQPASAVYDQAQGLISRWQRE CCCCCCCEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH IEDVAILEQAEELAQGGNIADYERAIAQLNRVPSGNPRYDEARQKIRQWRRQIEIAEDSP HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC TLAYAKDLAATNRLQEAIAEARTIQSGRALYNEAQENIRQWRNTIERTEDQPIFDRAVAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH GQQKRFDEAIAVANQIAPNRVLYDEMQARVRSWRQEQTAINNLNRAYQVANGNSVSAWVE HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHH AINLTQEIPSSASQLRAEGKQAADQWSYRILSVAQSQANISIPQAIATARQIPRNTAAYD HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHH AAQTQINTWQRLTTPSPSPQTIDVPTNL HHHHHHHHHHHHCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA