| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078990
Identifier: 170078990
GI number: 170078990
Start: 2480358
End: 2480696
Strand: Reverse
Name: 170078990
Synonym: SYNPCC7002_A2395
Alternate gene names: NA
Gene position: 2480696-2480358 (Counterclockwise)
Preceding gene: 170079000
Following gene: 170078989
Centisome position: 82.47
GC content: 48.08
Gene sequence:
>339_bases ATGGCTCAAATTCTTGATCCCATCCCAAATGATGACAACAAAGCTCTACTTTGCTGCTATGTAAATGCAACCAGTCAAAT TCAAGTTGCGCGTATTACAAATGTTGAAGATTGGTATTTTGAGCGGGTTGTTTTTCCCGGGCAACGGCTAATATTTGAAG CCCTCCCCCAGGCGATCTTAGAAATTCATACGGGGATGATGGCGAGTGCTATTTTATCGGACACGATCCCCTGCTATCGT CTGGCAATGCAAGAAACTGGCTCGGAAACAGATGAACCAGAGCCGGCCCCGGTGAATCAAGATATTCCTGCGGCTAGACC GGTGGCGATCGCCCCCTAA
Upstream 100 bases:
>100_bases TATGTCTTTGTAGTAGACGTTACAACCATTGGGGATCAATCGGTGTTAGCTTATCATCGAGAGATATAAAAGACTATTTA AATATTTACCCAGGAATCCC
Downstream 100 bases:
>100_bases GTTTTTCCTTAAATTTTTGCCACGAGCCATCCTCCGGGGTGGTTTTATTTTGTCTTCCCCCATCGTTAAACCCCAAAGCC AAAATGTAAGATAGAATACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYR LAMQETGSETDEPEPAPVNQDIPAARPVAIAP
Sequences:
>Translated_112_residues MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYR LAMQETGSETDEPEPAPVNQDIPAARPVAIAP >Mature_111_residues AQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAILEIHTGMMASAILSDTIPCYRL AMQETGSETDEPEPAPVNQDIPAARPVAIAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014964 [H]
Pfam domain/function: PF08865 DUF1830 [H]
EC number: NA
Molecular weight: Translated: 12355; Mature: 12224
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAIL CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH EIHTGMMASAILSDTIPCYRLAMQETGSETDEPEPAPVNQDIPAARPVAIAP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC >Mature Secondary Structure AQILDPIPNDDNKALLCCYVNATSQIQVARITNVEDWYFERVVFPGQRLIFEALPQAIL CCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHH EIHTGMMASAILSDTIPCYRLAMQETGSETDEPEPAPVNQDIPAARPVAIAP HHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]