| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is tuaD [H]
Identifier: 170078935
GI number: 170078935
Start: 2416906
End: 2418255
Strand: Direct
Name: tuaD [H]
Synonym: SYNPCC7002_A2340
Alternate gene names: 170078935
Gene position: 2416906-2418255 (Clockwise)
Preceding gene: 170078934
Following gene: 170078936
Centisome position: 80.35
GC content: 49.93
Gene sequence:
>1350_bases ATGAAAGTTTGTGTAATTGGAACGGGTTACGTGGGCCTGGTCACAGGGGTTTGCCTGGCGCACATGGGCCATGATGTCAT CTGCATCGACAACAATGAGCAGAAAATCAAGCTCATGCAGGCGGGGCGATCGCCGATTTATGAACCCGGTCTAGCGGAAC TGATGCAGGAAGAAATGGCCACCGGACGCTTGCAATTTAGTACAGACCTCAGTTTTGGCGTCAATCATGGGGAAATTCTG TTTATCGCTGTGGGTACCCCAGCCTTGCCGACGGGGGAAAGCGACACCCGCTATGTGGAGGCCGTGGCGAAGGGTATTGG TGAACATTTGCCCGCCGATAGTTACAAAGTAATTGTTAACAAATCAACGGTTCCGATTGGGTCGGGGGACTGGGTGCGGA TGATTGTCCTCGATGGAGTCAAACAGAAGCAAAACGGCCATACGGTGCAGTTTGATGTGGTCAGTAACCCCGAATTTCTC CGGGAAGGGTCAGCAATTTTCGATACTTTTAACCCCGATCGCATTGTTTTAGGTAGTAGCAACTCCAAGGCGATCGCCTT GATGAAACAGCTTTATGATCCCCTCATCCAAGGGCAATTTAGCGCGCCAGAACACCTCAAACCGATTCCGGTGGTGGAAA CTGACCTAAATTCCGCCGAAATGATTAAATATGCTGCCAATGCTTTCCTTGCAACGAAAATTAGCTTTATTAATGAAGTG GCGAATGTGTGCGATCGCGTGGGGGCAGACATTCTCCAGGTGGCGAAGGGCATCGGCCTCGATAGTCGCATTGGTAATAA ATTTCTCCAGGCAGGCTTGGGTTGGGGTGGTTCCTGTTTCCCGAAAGACGTGGCCGCTTTAGTACACACTGCCGAAGATT ATGGCTACCAAGCGCAACTCCTCGAAGCGGCAGTGACGGTGAATAATCGGCAAAAATTAATCGTCGTCGAAAAGCTTCAA CAGGAATTGAAAATTCTTAAGGGGAAAACCATTGGTTTGTTGGGGTTAACCTTCAAGCCAGACACCGATGATATGCGTGA TGCTCCATCCCTGAAGCTGATTGCAGAACTTAATCGTCTAGGAGCACGGGTGAAAGCCTATGACCCGATTGTGTCCCAAA ATGGCATTAGTCAAGGTCTTTCGGGCGTCCTGATTGAAAATAGCCCAGAAATGTTAGCAGATACCTGTGATGCTCTGGTT TTAGTCACGGACTGGCAAGAATTTTTGCACCTCGACTATGGACAGTTAGGCGATCGCCTCCAAAATCGGTTGATCATCGA TGGCCGGAATTTCCTCGACCGAGACGCCCTCGAAGCCCTGGGGTTCCGCTATGTGGGCATTGGCCATTAA
Upstream 100 bases:
>100_bases GCCCCTCAAGGTGGGCTTAGAAAAAACGATCGCCTATTTCCGCGATCGCCTCGCAGAATAACTAACGGACAACAACACGA GAAATTCACTAGAAATTGCG
Downstream 100 bases:
>100_bases GTGTTTTAAGCTTCAGAGCCTGTTTATAAAGAAAAAATTAAATCAAGACTGGATAAGGGATTTGGCTTCATTCGTCGCCA TGTAGATCAAGCGTCCTACA
Product: UDP-glucose dehydrogenase
Products: NA
Alternate protein names: UDP-Glc dehydrogenase; UDP-GlcDH; UDPGDH; Teichuronic acid biosynthesis protein tuaD [H]
Number of amino acids: Translated: 449; Mature: 449
Protein sequence:
>449_residues MKVCVIGTGYVGLVTGVCLAHMGHDVICIDNNEQKIKLMQAGRSPIYEPGLAELMQEEMATGRLQFSTDLSFGVNHGEIL FIAVGTPALPTGESDTRYVEAVAKGIGEHLPADSYKVIVNKSTVPIGSGDWVRMIVLDGVKQKQNGHTVQFDVVSNPEFL REGSAIFDTFNPDRIVLGSSNSKAIALMKQLYDPLIQGQFSAPEHLKPIPVVETDLNSAEMIKYAANAFLATKISFINEV ANVCDRVGADILQVAKGIGLDSRIGNKFLQAGLGWGGSCFPKDVAALVHTAEDYGYQAQLLEAAVTVNNRQKLIVVEKLQ QELKILKGKTIGLLGLTFKPDTDDMRDAPSLKLIAELNRLGARVKAYDPIVSQNGISQGLSGVLIENSPEMLADTCDALV LVTDWQEFLHLDYGQLGDRLQNRLIIDGRNFLDRDALEALGFRYVGIGH
Sequences:
>Translated_449_residues MKVCVIGTGYVGLVTGVCLAHMGHDVICIDNNEQKIKLMQAGRSPIYEPGLAELMQEEMATGRLQFSTDLSFGVNHGEIL FIAVGTPALPTGESDTRYVEAVAKGIGEHLPADSYKVIVNKSTVPIGSGDWVRMIVLDGVKQKQNGHTVQFDVVSNPEFL REGSAIFDTFNPDRIVLGSSNSKAIALMKQLYDPLIQGQFSAPEHLKPIPVVETDLNSAEMIKYAANAFLATKISFINEV ANVCDRVGADILQVAKGIGLDSRIGNKFLQAGLGWGGSCFPKDVAALVHTAEDYGYQAQLLEAAVTVNNRQKLIVVEKLQ QELKILKGKTIGLLGLTFKPDTDDMRDAPSLKLIAELNRLGARVKAYDPIVSQNGISQGLSGVLIENSPEMLADTCDALV LVTDWQEFLHLDYGQLGDRLQNRLIIDGRNFLDRDALEALGFRYVGIGH >Mature_449_residues MKVCVIGTGYVGLVTGVCLAHMGHDVICIDNNEQKIKLMQAGRSPIYEPGLAELMQEEMATGRLQFSTDLSFGVNHGEIL FIAVGTPALPTGESDTRYVEAVAKGIGEHLPADSYKVIVNKSTVPIGSGDWVRMIVLDGVKQKQNGHTVQFDVVSNPEFL REGSAIFDTFNPDRIVLGSSNSKAIALMKQLYDPLIQGQFSAPEHLKPIPVVETDLNSAEMIKYAANAFLATKISFINEV ANVCDRVGADILQVAKGIGLDSRIGNKFLQAGLGWGGSCFPKDVAALVHTAEDYGYQAQLLEAAVTVNNRQKLIVVEKLQ QELKILKGKTIGLLGLTFKPDTDDMRDAPSLKLIAELNRLGARVKAYDPIVSQNGISQGLSGVLIENSPEMLADTCDALV LVTDWQEFLHLDYGQLGDRLQNRLIIDGRNFLDRDALEALGFRYVGIGH
Specific function: Catalyzes the conversion of UDP-glucose into UDP- glucuronate, one of the precursors of teichuronic acid [H]
COG id: COG1004
COG function: function code M; Predicted UDP-glucose 6-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDP-glucose/GDP-mannose dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4507813, Length=477, Percent_Identity=35.2201257861635, Blast_Score=255, Evalue=5e-68, Organism=Homo sapiens, GI296040438, Length=378, Percent_Identity=34.9206349206349, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI296040443, Length=323, Percent_Identity=35.9133126934984, Blast_Score=177, Evalue=2e-44, Organism=Escherichia coli, GI1788340, Length=382, Percent_Identity=27.7486910994764, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI48994968, Length=442, Percent_Identity=26.0180995475113, Blast_Score=133, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17560350, Length=473, Percent_Identity=35.5179704016913, Blast_Score=270, Evalue=8e-73, Organism=Drosophila melanogaster, GI17136908, Length=476, Percent_Identity=34.6638655462185, Blast_Score=262, Evalue=4e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR021157 - InterPro: IPR016040 - InterPro: IPR017476 - InterPro: IPR014027 - InterPro: IPR014026 - InterPro: IPR014028 - InterPro: IPR001732 [H]
Pfam domain/function: PF00984 UDPG_MGDP_dh; PF03720 UDPG_MGDP_dh_C; PF03721 UDPG_MGDP_dh_N [H]
EC number: =1.1.1.22 [H]
Molecular weight: Translated: 48822; Mature: 48822
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVCVIGTGYVGLVTGVCLAHMGHDVICIDNNEQKIKLMQAGRSPIYEPGLAELMQEEMA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHH TGRLQFSTDLSFGVNHGEILFIAVGTPALPTGESDTRYVEAVAKGIGEHLPADSYKVIVN CCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE KSTVPIGSGDWVRMIVLDGVKQKQNGHTVQFDVVSNPEFLREGSAIFDTFNPDRIVLGSS CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCEEECCCCCEEEEECC NSKAIALMKQLYDPLIQGQFSAPEHLKPIPVVETDLNSAEMIKYAANAFLATKISFINEV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ANVCDRVGADILQVAKGIGLDSRIGNKFLQAGLGWGGSCFPKDVAALVHTAEDYGYQAQL HHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHH LEAAVTVNNRQKLIVVEKLQQELKILKGKTIGLLGLTFKPDTDDMRDAPSLKLIAELNRL HHHHHEECCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCHHCCCCCHHHHHHHHHH GARVKAYDPIVSQNGISQGLSGVLIENSPEMLADTCDALVLVTDWQEFLHLDYGQLGDRL CCEEECCCCCCCCCCHHHCCCEEEECCCHHHHHHHHCEEEEEECHHHHHHCCHHHHHHHH QNRLIIDGRNFLDRDALEALGFRYVGIGH HCCEEECCCCCCHHHHHHHCCEEEEECCC >Mature Secondary Structure MKVCVIGTGYVGLVTGVCLAHMGHDVICIDNNEQKIKLMQAGRSPIYEPGLAELMQEEMA CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHH TGRLQFSTDLSFGVNHGEILFIAVGTPALPTGESDTRYVEAVAKGIGEHLPADSYKVIVN CCEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEE KSTVPIGSGDWVRMIVLDGVKQKQNGHTVQFDVVSNPEFLREGSAIFDTFNPDRIVLGSS CCCCCCCCCCEEEEEEECCCCCCCCCCEEEEEECCCHHHHHCCCCEEECCCCCEEEEECC NSKAIALMKQLYDPLIQGQFSAPEHLKPIPVVETDLNSAEMIKYAANAFLATKISFINEV CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH ANVCDRVGADILQVAKGIGLDSRIGNKFLQAGLGWGGSCFPKDVAALVHTAEDYGYQAQL HHHHHHHCHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHH LEAAVTVNNRQKLIVVEKLQQELKILKGKTIGLLGLTFKPDTDDMRDAPSLKLIAELNRL HHHHHEECCCCEEEEHHHHHHHHHHHCCCEEEEEEEEECCCCCHHCCCCCHHHHHHHHHH GARVKAYDPIVSQNGISQGLSGVLIENSPEMLADTCDALVLVTDWQEFLHLDYGQLGDRL CCEEECCCCCCCCCCHHHCCCEEEECCCHHHHHHHHCEEEEEECHHHHHHCCHHHHHHHH QNRLIIDGRNFLDRDALEALGFRYVGIGH HCCEEECCCCCCHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10048024; 9384377; 10376820 [H]