| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078865
Identifier: 170078865
GI number: 170078865
Start: 2348921
End: 2349913
Strand: Reverse
Name: 170078865
Synonym: SYNPCC7002_A2269
Alternate gene names: NA
Gene position: 2349913-2348921 (Counterclockwise)
Preceding gene: 170078867
Following gene: 170078864
Centisome position: 78.12
GC content: 51.96
Gene sequence:
>993_bases ATGCGATCGCTTTACTTCCTCGTCCCCGGTGTCAGTAAAAAATTTGCCAGCGGTGGCCTCTTTGCCGAAATCAAGACCTG TGAACTGGCCCAACAACTGCAATCGGCCCATTTAGTCACCTACCGAGAAAAATCCCCAGATCATCTCTATTTGCCGGAAC TACTGCCCCAGGTGCAGCCCCAGGAGGCAATTTTCGTGGTCAGTTGGGGCTTTGATATTCCGCGTCTGGTCAAACAACTG CGATCGCATCCGGTGGTTTACCATGCCCACAGCACCGGCTATGGGTTTAAGCTCCCCAGTCGCATTCCCATTTGGGCGGT GAGTCGCAATTCCTTGGGCTATTGGGGGCAACGGGCACCGAATAATCCCTTGTTTTATCTGCCCAATCAAATTTCCCCGG AGTTCGAGAACTGGCAGCAAGAACGGGATATTGATGTATTGGTGCAAACCCGCAAAACTTCTAGCTATGTGCTCCAGCAA CTGGTGCCCTACCTCCAGCAAAGATGTCGCGTAGAAGTGGTAAATTCCTTCGTGCCAGACCTTGCGGCCCTCTTTAATCG CAGTAAAATTTATCTCTATGATTCGGCGGAATATTGGCTGAATAATGCGGTGAGTGAAGGCTTTGGTTTGCCCCCCCTAG AGGCGATCGCCTGTGGTTGTCAGGTCTTTAGTAGCGTCAACGGTGCTTTAGCAGATTACTTAGATCCGGGCTTCAATTGT CAAAAAATCAGTACCTATTGTGTCGAATACGATGGCGATCGCCTTTTGGCCGCCCTCAACAATCCCCCAGCCGCCACCAA TGCCCAAGCCCTCTTGCAGGAATACCGCACCGAAACGATTCTGCTCCGGTTTGCCACCATTCTCCAGGAGGTTAATCATT TCTTTGACTACCAAGGCCAATACCCAGGCAATATCCAACTCCAGCGACAAAATCCTCTCCTGGTGCGCCTCCGACTCGCC CTCCGTCAACAGCTTGCCCGGTGGCGCACCTAA
Upstream 100 bases:
>100_bases CCAAGGAACACTGACCCTCTGATTTTAAGGGGATTTCTGGCCCTGCCGAGTATTTTTCCAGATAAACAGTATATTTTTAG AGACTCTTCCAATGGCTACT
Downstream 100 bases:
>100_bases TCCCCTTTCATGTTTTTAATGTCCTAAACGTTTCTTTGTAACCTTGATCGGCCATGACCATCGCCAGAACTATTTGCCTC GGCTTTCTCGGAGCTATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MRSLYFLVPGVSKKFASGGLFAEIKTCELAQQLQSAHLVTYREKSPDHLYLPELLPQVQPQEAIFVVSWGFDIPRLVKQL RSHPVVYHAHSTGYGFKLPSRIPIWAVSRNSLGYWGQRAPNNPLFYLPNQISPEFENWQQERDIDVLVQTRKTSSYVLQQ LVPYLQQRCRVEVVNSFVPDLAALFNRSKIYLYDSAEYWLNNAVSEGFGLPPLEAIACGCQVFSSVNGALADYLDPGFNC QKISTYCVEYDGDRLLAALNNPPAATNAQALLQEYRTETILLRFATILQEVNHFFDYQGQYPGNIQLQRQNPLLVRLRLA LRQQLARWRT
Sequences:
>Translated_330_residues MRSLYFLVPGVSKKFASGGLFAEIKTCELAQQLQSAHLVTYREKSPDHLYLPELLPQVQPQEAIFVVSWGFDIPRLVKQL RSHPVVYHAHSTGYGFKLPSRIPIWAVSRNSLGYWGQRAPNNPLFYLPNQISPEFENWQQERDIDVLVQTRKTSSYVLQQ LVPYLQQRCRVEVVNSFVPDLAALFNRSKIYLYDSAEYWLNNAVSEGFGLPPLEAIACGCQVFSSVNGALADYLDPGFNC QKISTYCVEYDGDRLLAALNNPPAATNAQALLQEYRTETILLRFATILQEVNHFFDYQGQYPGNIQLQRQNPLLVRLRLA LRQQLARWRT >Mature_330_residues MRSLYFLVPGVSKKFASGGLFAEIKTCELAQQLQSAHLVTYREKSPDHLYLPELLPQVQPQEAIFVVSWGFDIPRLVKQL RSHPVVYHAHSTGYGFKLPSRIPIWAVSRNSLGYWGQRAPNNPLFYLPNQISPEFENWQQERDIDVLVQTRKTSSYVLQQ LVPYLQQRCRVEVVNSFVPDLAALFNRSKIYLYDSAEYWLNNAVSEGFGLPPLEAIACGCQVFSSVNGALADYLDPGFNC QKISTYCVEYDGDRLLAALNNPPAATNAQALLQEYRTETILLRFATILQEVNHFFDYQGQYPGNIQLQRQNPLLVRLRLA LRQQLARWRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37777; Mature: 37777
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLYFLVPGVSKKFASGGLFAEIKTCELAQQLQSAHLVTYREKSPDHLYLPELLPQVQP CCEEEEEECCCCHHHHCCCCEEEHHHHHHHHHHHHHHEEEEECCCCCEEECHHHCCCCCC QEAIFVVSWGFDIPRLVKQLRSHPVVYHAHSTGYGFKLPSRIPIWAVSRNSLGYWGQRAP CCEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCC NNPLFYLPNQISPEFENWQQERDIDVLVQTRKTSSYVLQQLVPYLQQRCRVEVVNSFVPD CCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALFNRSKIYLYDSAEYWLNNAVSEGFGLPPLEAIACGCQVFSSVNGALADYLDPGFNC HHHHHCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCH QKISTYCVEYDGDRLLAALNNPPAATNAQALLQEYRTETILLRFATILQEVNHFFDYQGQ HHEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPGNIQLQRQNPLLVRLRLALRQQLARWRT CCCCEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRSLYFLVPGVSKKFASGGLFAEIKTCELAQQLQSAHLVTYREKSPDHLYLPELLPQVQP CCEEEEEECCCCHHHHCCCCEEEHHHHHHHHHHHHHHEEEEECCCCCEEECHHHCCCCCC QEAIFVVSWGFDIPRLVKQLRSHPVVYHAHSTGYGFKLPSRIPIWAVSRNSLGYWGQRAP CCEEEEEEECCCHHHHHHHHHCCCEEEEECCCCCCEECCCCCEEEEEECCCCCCCCCCCC NNPLFYLPNQISPEFENWQQERDIDVLVQTRKTSSYVLQQLVPYLQQRCRVEVVNSFVPD CCCEEECCCCCCCCHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAALFNRSKIYLYDSAEYWLNNAVSEGFGLPPLEAIACGCQVFSSVNGALADYLDPGFNC HHHHHCCCEEEEEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCCCCH QKISTYCVEYDGDRLLAALNNPPAATNAQALLQEYRTETILLRFATILQEVNHFFDYQGQ HHEEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YPGNIQLQRQNPLLVRLRLALRQQLARWRT CCCCEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA