| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is ktrB [H]
Identifier: 170078864
GI number: 170078864
Start: 2347533
End: 2348801
Strand: Reverse
Name: ktrB [H]
Synonym: SYNPCC7002_A2268
Alternate gene names: 170078864
Gene position: 2348801-2347533 (Counterclockwise)
Preceding gene: 170078865
Following gene: 170078863
Centisome position: 78.08
GC content: 50.99
Gene sequence:
>1269_bases ATGTTGCCCTTTGCCACCGCCTCCGGGGAATGGAATAGCCCCCTCGTCGCCCTATTTACATCGACGTCCGCCATCTGTGT CACGGGGTTAATTGTGGTGGATACAGGAACAGCCTTTTCCAACTTTGGCCAGGGGGTCATTCTCCTCTTGATCCAACTGG GGGGACTGGGCTACATGACCCTCTCGACATTTCTCATGCTGCTGCTGGGGCGTCGGTTTGATTTGGCTCAAAAATTTGCC ATTAAAGAATCCTTTGACCAACCCTACAACCAAGGAACGCGCAACTTAATTCGTTCGATTATCGCCACGACTCTGATTGG GGAACTGACGGGGATTTTCCTCCTGTTTGGGCGGTTTAGTCGGGATTTTGATCCCGGTGAAGGGTTATGGTTAGCCATTT TTCACAGCATCAGCGCCTGGAACAATGCGGGCTTTAGTTTGTTTGCGGACAGTTTAGTGGGCTATCAAGATTCCCTTTTG GTGAACGGGGCGATCTCTGGTCTGATTATTTTTGGGGGCATTGGTTATGAGGCGATCATCGAAATGTATCTGTGGTTGCG GCACCGTCTCCAGCGCAAAAGCCGACGCTTTACCTTTTCGTTGAATTTTGAAGTGGTCACCTCTACCACCTTCTGGCTCC TGGGTCTGGGGACTGTGGCTTTTTTGTTTGTGGAATGGGCCAATCCAACCACCTTTGCGGGGATGAGTTGGGGTGATAAG GCGATCGCCGCCTGGTTCCAATCGGTGACCACCCGCACCGCTGGGTTTAATAGTATCGACATCGGCAAACTGAGCACCGC CGGACTGTTTATCACCATGGGTTTGATGTTTATTGGGGCGAGTCCCAGTGGCACCGGGGGCGGGATTAAAACAACCACCA TTAATATCCTGGCGAATTGCACTAAATCCGTGCTCTATGGTCAAACCCGTGTCACTGTTTTTGACCGTGAAATTGCCCAG AGTATCGTTTTTAAGGCGATCGCCGTTGTTTTTGGTTCTGCCACCGTGATTACCATTGCTACAGCGATTATTTCCATCAG CAACCCTGAGATCGAATTAATTGCGATTTTGTTTGAGGTAATTTCGGCCTTTGCCACCGTTGGCCTGTCCACGGGGATTA CTGCCAGCCTTTCCGCTGTCGGTCAACTGACCCTAATTGCCACCATGTACTGTGGTCGGGTCGGGGTACTCTTGCTGATG TCGGCCATCGTCGGAGAAATCACCCCACGCCGCATTAGCTATCCTGAAGAAAATTTATTGGTGGGTTGA
Upstream 100 bases:
>100_bases TGTCCTAAACGTTTCTTTGTAACCTTGATCGGCCATGACCATCGCCAGAACTATTTGCCTCGGCTTTCTCGGAGCTATTT TATTAGGGACGCTGCTTTTG
Downstream 100 bases:
>100_bases GCCGCAGCACCTCGGCCAGAGGAATGTCCCAAGGCTTCACCAGCGCTTGAAATTCGAGTAGGATCATCGGTTAAGATGCG GCGATCGCCTCCACAGCATT
Product: Trk family potassium uptake protein
Products: NA
Alternate protein names: K(+)-uptake protein ktrB [H]
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MLPFATASGEWNSPLVALFTSTSAICVTGLIVVDTGTAFSNFGQGVILLLIQLGGLGYMTLSTFLMLLLGRRFDLAQKFA IKESFDQPYNQGTRNLIRSIIATTLIGELTGIFLLFGRFSRDFDPGEGLWLAIFHSISAWNNAGFSLFADSLVGYQDSLL VNGAISGLIIFGGIGYEAIIEMYLWLRHRLQRKSRRFTFSLNFEVVTSTTFWLLGLGTVAFLFVEWANPTTFAGMSWGDK AIAAWFQSVTTRTAGFNSIDIGKLSTAGLFITMGLMFIGASPSGTGGGIKTTTINILANCTKSVLYGQTRVTVFDREIAQ SIVFKAIAVVFGSATVITIATAIISISNPEIELIAILFEVISAFATVGLSTGITASLSAVGQLTLIATMYCGRVGVLLLM SAIVGEITPRRISYPEENLLVG
Sequences:
>Translated_422_residues MLPFATASGEWNSPLVALFTSTSAICVTGLIVVDTGTAFSNFGQGVILLLIQLGGLGYMTLSTFLMLLLGRRFDLAQKFA IKESFDQPYNQGTRNLIRSIIATTLIGELTGIFLLFGRFSRDFDPGEGLWLAIFHSISAWNNAGFSLFADSLVGYQDSLL VNGAISGLIIFGGIGYEAIIEMYLWLRHRLQRKSRRFTFSLNFEVVTSTTFWLLGLGTVAFLFVEWANPTTFAGMSWGDK AIAAWFQSVTTRTAGFNSIDIGKLSTAGLFITMGLMFIGASPSGTGGGIKTTTINILANCTKSVLYGQTRVTVFDREIAQ SIVFKAIAVVFGSATVITIATAIISISNPEIELIAILFEVISAFATVGLSTGITASLSAVGQLTLIATMYCGRVGVLLLM SAIVGEITPRRISYPEENLLVG >Mature_422_residues MLPFATASGEWNSPLVALFTSTSAICVTGLIVVDTGTAFSNFGQGVILLLIQLGGLGYMTLSTFLMLLLGRRFDLAQKFA IKESFDQPYNQGTRNLIRSIIATTLIGELTGIFLLFGRFSRDFDPGEGLWLAIFHSISAWNNAGFSLFADSLVGYQDSLL VNGAISGLIIFGGIGYEAIIEMYLWLRHRLQRKSRRFTFSLNFEVVTSTTFWLLGLGTVAFLFVEWANPTTFAGMSWGDK AIAAWFQSVTTRTAGFNSIDIGKLSTAGLFITMGLMFIGASPSGTGGGIKTTTINILANCTKSVLYGQTRVTVFDREIAQ SIVFKAIAVVFGSATVITIATAIISISNPEIELIAILFEVISAFATVGLSTGITASLSAVGQLTLIATMYCGRVGVLLLM SAIVGEITPRRISYPEENLLVG
Specific function: Integral membrane subunit of the KtrAB potassium uptake transporter. The 2 major potassium transporter complexes KtrAB and KtrCD confer resistance to both suddenly imposed and prolonged osmotic stress [H]
COG id: COG0168
COG function: function code P; Trk-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the trkH potassium transport family. Ktr (TC 2.A.38.4) subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003445 - InterPro: IPR004772 [H]
Pfam domain/function: PF02386 TrkH [H]
EC number: NA
Molecular weight: Translated: 45384; Mature: 45384
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFATASGEWNSPLVALFTSTSAICVTGLIVVDTGTAFSNFGQGVILLLIQLGGLGYMT CCCCCCCCCCCCCCEEEEEECCCHHHHEEEEEEECCCHHHHHCCHHHHHHHHHCCCHHHH LSTFLMLLLGRRFDLAQKFAIKESFDQPYNQGTRNLIRSIIATTLIGELTGIFLLFGRFS HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDFDPGEGLWLAIFHSISAWNNAGFSLFADSLVGYQDSLLVNGAISGLIIFGGIGYEAII CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHEEEHHCCCEEEEEECCCHHHHH EMYLWLRHRLQRKSRRFTFSLNFEVVTSTTFWLLGLGTVAFLFVEWANPTTFAGMSWGDK HHHHHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHHHHHHEECCCCCEECCCCCCHH AIAAWFQSVTTRTAGFNSIDIGKLSTAGLFITMGLMFIGASPSGTGGGIKTTTINILANC HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHH TKSVLYGQTRVTVFDREIAQSIVFKAIAVVFGSATVITIATAIISISNPEIELIAILFEV HHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH ISAFATVGLSTGITASLSAVGQLTLIATMYCGRVGVLLLMSAIVGEITPRRISYPEENLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC VG CC >Mature Secondary Structure MLPFATASGEWNSPLVALFTSTSAICVTGLIVVDTGTAFSNFGQGVILLLIQLGGLGYMT CCCCCCCCCCCCCCEEEEEECCCHHHHEEEEEEECCCHHHHHCCHHHHHHHHHCCCHHHH LSTFLMLLLGRRFDLAQKFAIKESFDQPYNQGTRNLIRSIIATTLIGELTGIFLLFGRFS HHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC RDFDPGEGLWLAIFHSISAWNNAGFSLFADSLVGYQDSLLVNGAISGLIIFGGIGYEAII CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHEEEHHCCCEEEEEECCCHHHHH EMYLWLRHRLQRKSRRFTFSLNFEVVTSTTFWLLGLGTVAFLFVEWANPTTFAGMSWGDK HHHHHHHHHHHHHHCCEEEEEEEEEEEHHHHHHHHHHHHHHHHEECCCCCEECCCCCCHH AIAAWFQSVTTRTAGFNSIDIGKLSTAGLFITMGLMFIGASPSGTGGGIKTTTINILANC HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCCCCCCEEHHHHHHHHHH TKSVLYGQTRVTVFDREIAQSIVFKAIAVVFGSATVITIATAIISISNPEIELIAILFEV HHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH ISAFATVGLSTGITASLSAVGQLTLIATMYCGRVGVLLLMSAIVGEITPRRISYPEENLL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCC VG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]