Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078828

Identifier: 170078828

GI number: 170078828

Start: 2316914

End: 2317705

Strand: Direct

Name: 170078828

Synonym: SYNPCC7002_A2231

Alternate gene names: NA

Gene position: 2316914-2317705 (Clockwise)

Preceding gene: 170078827

Following gene: 170078829

Centisome position: 77.02

GC content: 50.63

Gene sequence:

>792_bases
ATGCTGAATAACATTGTGGCGATTTTTCGCCGGGAACTACAGAGCTACTTCACCGCTCCCCTCGCCTATATTTTTGCAAC
GTTGTTGTGGTTTTTGGGAGGATTTTTCTTCCTAACGCTCCTGATCGGCCCCCAGGGCATTGTCACCTTTGTCGCCACCC
AAGAACAGATGGGCGTTGCCTTACCTCCCATTGATGTAGCCACAGAATTTCTCCAGGCTTTTTGGGGCATCCTGGGCATT
TTAGTCTTGTTTCTGTTGCCGTTGCTCTCCATGGGTCTCTATGCTGAAGAACGCAAACAGGGCACTTTGGAACTTTTAGC
GACTTCCCCGGTGACGAACTGGGCGGTGGCAGTGGGCAAATTGTTGGGAGTCGTGACTTTTTTTTCGGTACTGTTCCTGC
CCATGGTGCTGTGGGAACTGATTGTCTTAGTGAATGCAGCCCCAGCTTTTCCCCTCAGTCTTTTTCTTTTAGCGCATTTG
GGCTTGTTGCTCTTGGTGGCCGCTATTTTATCTTTGGGGATGTTCGTGTCGTCTCTCACAGACAGTTCCCTGATTGCGGC
GGTCTTGACCTTTACCCTAGTGCTGATGTTGTGGCTGTTGGATATGCTGGGCGATCGCCTGTCGGGGCCGTTGGGCAATG
GCCTCAAACATTTCTCTTTACTGAAGCATTACAACAATTTCCTCGAGGGAATTTTCGATAGCAGTAGCCTGGTCTTACTC
CTCAGCTATAGCATTCTGGGGGTTGTCCTCACGGCCCAATCCATTGAAGCTTTGCGCTGGACACGGCGTTGA

Upstream 100 bases:

>100_bases
CTCTATGAAATGCAACGACTGCGCCCCAGCCTTGAGGACGTTTTTTTAGAATTATTAGACGCTGAGGCGAACGATCCGAT
GTCTGAACAACTCCATGCTG

Downstream 100 bases:

>100_bases
TGGTTTCTCGATATTGTTAACAGAGCATCATGTTTCCACAGCAACGATTTTCACGATATTTCATTTGGTTAGGCTTGGCT
CTGGTGGTCGCGGGCGCTGT

Product: ABC transporter family protein

Products: NA

Alternate protein names: ABC-2 Type Transporter Superfamily; ABC-2 Type Transport System Permease Protein; ABC-2 Type Transport System Permease; ABC Transporter Permease; ABC Transporter Permease Protein; ABC-2 Type Transporter Permease; Permease Protein Of ABC Transporter; ABC Transporter Family Protein

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI
LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL
GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL
LSYSILGVVLTAQSIEALRWTRR

Sequences:

>Translated_263_residues
MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI
LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL
GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL
LSYSILGVVLTAQSIEALRWTRR
>Mature_263_residues
MLNNIVAIFRRELQSYFTAPLAYIFATLLWFLGGFFFLTLLIGPQGIVTFVATQEQMGVALPPIDVATEFLQAFWGILGI
LVLFLLPLLSMGLYAEERKQGTLELLATSPVTNWAVAVGKLLGVVTFFSVLFLPMVLWELIVLVNAAPAFPLSLFLLAHL
GLLLLVAAILSLGMFVSSLTDSSLIAAVLTFTLVLMLWLLDMLGDRLSGPLGNGLKHFSLLKHYNNFLEGIFDSSSLVLL
LSYSILGVVLTAQSIEALRWTRR

Specific function: Unknown

COG id: COG1277

COG function: function code R; ABC-type transport system involved in multi-copper enzyme maturation, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28895; Mature: 28895

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA