Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078750

Identifier: 170078750

GI number: 170078750

Start: 2233473

End: 2233769

Strand: Reverse

Name: 170078750

Synonym: SYNPCC7002_A2152

Alternate gene names: NA

Gene position: 2233769-2233473 (Counterclockwise)

Preceding gene: 170078761

Following gene: 170078749

Centisome position: 74.26

GC content: 49.83

Gene sequence:

>297_bases
ATGGCTAATATCACCTACGTTCCGGCAAATAAGGACGTGATTGCGGCAGATGGTGCAAATTTACGGGAAAAAGCCCTGCA
AAATGGCGTGGATTTGTACACTTTCGGCGGAAAATTGATGAATTGCGGTGGTGTTGGCCAATGCGGAACCTGCATTGTCG
AGATTCTGGAGGGGATGGAAAACCTGTCGCCCAAGACTGATTTTGAGAAGCGGCGTCTCAAGCGTAAGCCCCCCAGCTAT
CGCCTTGCTTGCCAAACCTTGGCCCATGGGGATGTTGTTGTAAAAACCAAACCCTAA

Upstream 100 bases:

>100_bases
GCCTTAGGATCGACAAAACAGCGTTGGGTTCGTAATTTTTCTTATAAAAACTTAACCTTGTTAAAATAGAATTGATCATT
TATTCAACACAGGAGGGTTC

Downstream 100 bases:

>100_bases
GGGCAGCCTCTTTGGTTTTTTGTTTAGGAAGATATTCTTTGGGAATCCCCGTGGCGATCGCCCCTGGTAAGGAGCTAGAG
GTGATATTCTTGATATCATT

Product: putative ferredoxin (2Fe-2S)

Products: NA

Alternate protein names: Ferredoxin 2Fe-2S Type; Hydrogenase Component

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MANITYVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGMENLSPKTDFEKRRLKRKPPSY
RLACQTLAHGDVVVKTKP

Sequences:

>Translated_98_residues
MANITYVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGMENLSPKTDFEKRRLKRKPPSY
RLACQTLAHGDVVVKTKP
>Mature_97_residues
ANITYVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGMENLSPKTDFEKRRLKRKPPSYR
LACQTLAHGDVVVKTKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10640; Mature: 10508

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANITYVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGME
CCCEEECCCCCCEEEECCCCHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHH
NLSPKTDFEKRRLKRKPPSYRLACQTLAHGDVVVKTKP
CCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECC
>Mature Secondary Structure 
ANITYVPANKDVIAADGANLREKALQNGVDLYTFGGKLMNCGGVGQCGTCIVEILEGME
CCEEECCCCCCEEEECCCCHHHHHHHCCCEEEEECCEEECCCCCCHHHHHHHHHHHHHH
NLSPKTDFEKRRLKRKPPSYRLACQTLAHGDVVVKTKP
CCCCCCCHHHHHHHCCCCCHHHHHHCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA