Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is glgP [H]

Identifier: 170078737

GI number: 170078737

Start: 2219908

End: 2222472

Strand: Direct

Name: glgP [H]

Synonym: SYNPCC7002_A2139

Alternate gene names: 170078737

Gene position: 2219908-2222472 (Clockwise)

Preceding gene: 170078736

Following gene: 170078738

Centisome position: 73.8

GC content: 52.63

Gene sequence:

>2565_bases
ATGAAACCGACCCACAAGTTTCAGGTCAAAGCCGTTTTACCCCCTGTCCTGGAACCCCTACGCCGCCTCGCCCATAACAT
CCACTGGGATTGGAATGTCGCCGCAAAAAGTCTCTTTGTTCGCCTCGATCCAGACCTATGGCAGCAGACGAGCCACAATC
CGGTGGCGATGTTGGGTCGCGTTGACCAAGCCCGCCTCGATGAATTAGCCAAGGATGACGGTTTTATCGCCCACATGGAA
CGGGCCATTGAACAGCTCGATGACTACCTCCAACAACACACTTGGTACCACAAAGCACGGGGCGAAACCAAAGGGAAAGA
ATGCTATGCCTATTTCTGTGCGGAGTATGGCCTCAGCTACTGCCTACCGATCTATTCCGGGGGATTGGGGATTCTTGCGG
GGGATCACCTCAAATCCGCCAGTGATCTCGGTTTACCCCTAGTGGCCGTTGGTTTACTGTACCAGGAGGGGTATTTCGCC
CAGTATCTCAACCATGACGGCTGGCAACAGGAAGAATATCCGATCAATGATTTCTACAATATGCCCCTCCATTTAGAAAA
AGATGACCAGGGAAATGAACTGATCATTGAGGTGGAATTTCCGGGGCGGATGATCTATGCACGGGTTTGGCGTATCGATG
TGGGGACGGTGCCCCTCTATATGTTAGATACCAACATTGAGCAAAATACTAACCCCTACGACCACGACATTACCGATGAA
CTGTATGGAGGTGATCGCGATCTCCGGCTCCACCAAGAGATCCTCCTGGGTATCGGTGGCGTGCGCATGCTCGAAAAACT
AGGCTATAAACCGACGGTCTACCACATGAACGAAGGCCACAGCGCCTTTTTGATCCTGGAGCGCATCCGCAAACTCATGC
AAGAGCAGGGCTTAACCTTCCGCCATGCCCAACAGTTTGCCCTCTCGACCCAAATGTTTACGACCCATACCCCCGTGTCC
GCTGGGTTTGATCTCTTTTCCCCGGAGCAAACCCTGCATTATGTGGGTCACTATGCCGAAAAATTTGGCCTCTCCCCAGA
CCGCTTCCTGGGCCTGGGTCGGGAAAATACTGGGGATCTAGAAGCGCCCTTTAATATGGCGATCTTTGCCCTCAAACACA
GTGCTTTTATCAATGGTGTGAGTCAACTCCATGGCCAAGTTTCCCGGGAAATGTTCCATAGCTTGTGGCCTGATTTTCCC
CGCGACGAAGTGGGGATTACCTCGATCACGAATGGTGTCCATGCCCGCAGCGTCACCGCCCCCGCCACCCAAGATCTCTA
CGACCGCTACCTGGCCCCCACCTGGGATGAAGCCCCCGCCGAAAGCCATATCTGGGAAAAAGTGAGCACCATTCCCAACG
AAGAACTGTGGCGTAACCACGAGCGTCAACGCTCCGATTTGGTTGTTTATATCCGACAGCACCTCGCCAAGCAACTACAA
AAACAAGGGGCCACTGAAGCGGCGATCGCCAAAGCCCGCCAGGTACTCAAGCCCAACCTCCTGACCATCGGCTTTGCCCG
TCGCTTTGCCACCTACAAACGGGCTAATCTCTTTTTGTATGACATTGAACGAATTAAAAAAATTATCCTCGGCAATCCAG
AGCGTCAAGTGCAATTTGTCATTGCCGGGAAAGCCCACCCAAAAGATATTCCGGGGAAAGAACTAATCCGCAACATCATC
CATACCGTCCAGGAAGAAGGCCTCGAAGATTACGTCGTCTTCTTACCCAACTACAATATTCACATTGCCCGCAAAATGGT
GTCTGGGTGCGATGTGTGGCTTAATACCCCCCGACGCCCCCGGGAAGCCTCTGGCACTTCCGGGATGAAAGCGGCGATGA
ATGGCTTGCCGAATTTAAGCGTCCTTGATGGCTGGTGGGATGAGGCCGACTATACCCGCACCGGTTGGGCGATCGGCCAC
GGGGAAATTTACGATGATCAAGATTACCAAGACCGGGTAGAAGCCAGTGCCCTGTATGAACTGCTAGAAAAAGAAATTGT
GCCGCTGTTCTATACGCGCAACAGTTTCGATGTCCCCGAAGGCTGGGTCAATAAAATGAAGGAAGCGATTCGCCTGAATT
GCCCCATGTTTAATACGTCGCGGATGCTCCGGGACTATGCCCAAAAGGCTTATTTTAAATTGAGCGATCGCCATTTTGAA
CTCAGCGACAATCACTACCAAGCCGTCCAAGAACTCGCCGATTGGAAATCCCAACTATTTAAAGCCTGGTACAACATCCG
CGTCGAAGCCTTTGATGTCGGGGAGTCCGCCGAAATCGATATTCAACAGCCCGTCCATGTCAAAGCAATCCTCGATCTCG
CGGCCCTGACCCCAGACGATCTGGCCGTGCAAATTTACCTCGGCACCATCAATGACCAGGACGAACTCATTAACGGCGAA
AGTTACCCTATGACCTTCCAGGGCCTGACCACCGACCAAAAAGCAATCTACCAAGGCGTTGTGCAATACAAAAAAAGTGG
CTACCAAGGCATGGCCCTACGTATTCTCCCCCACCACCCTCACCTAGATGATGCCACCGAGCCCCGGCTCATCCGTTGGG
CCTAG

Upstream 100 bases:

>100_bases
TCGATTTATAAATTCCCCAGGGGCGATCGCCAGAAAATCAAAGGGAATTCGCTATTTATTAAAGACAGATCATCCCGTTG
TCCGTTGAAGGATTTTTCCC

Downstream 100 bases:

>100_bases
GACAAACCGTCCAAGAGACGATGCCAATGGCAATTTACCCCTATACTGGGGAAGAACTTTCCCTGAGAGAGTTTACGTTT
CTTAAAATTATCGGGCAATC

Product: alpha-glucan phosphorylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME
RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA
QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE
LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS
AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP
RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ
KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII
HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH
GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE
LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE
SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA

Sequences:

>Translated_854_residues
MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME
RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA
QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE
LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS
AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP
RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ
KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII
HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH
GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE
LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE
SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA
>Mature_854_residues
MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGRVDQARLDELAKDDGFIAHME
RAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSYCLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFA
QYLNHDGWQQEEYPINDFYNMPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE
LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTFRHAQQFALSTQMFTTHTPVS
AGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDLEAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFP
RDEVGITSITNGVHARSVTAPATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ
KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFVIAGKAHPKDIPGKELIRNII
HTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRPREASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGH
GEIYDDQDYQDRVEASALYELLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE
LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDDLAVQIYLGTINDQDELINGE
SYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHPHLDDATEPRLIRWA

Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [

COG id: COG0058

COG function: function code G; Glucan phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycogen phosphorylase family [H]

Homologues:

Organism=Homo sapiens, GI21361370, Length=578, Percent_Identity=22.1453287197232, Blast_Score=72, Evalue=3e-12,
Organism=Escherichia coli, GI2367228, Length=424, Percent_Identity=25.9433962264151, Blast_Score=86, Evalue=8e-18,
Organism=Escherichia coli, GI48994936, Length=578, Percent_Identity=23.5294117647059, Blast_Score=80, Evalue=5e-16,
Organism=Drosophila melanogaster, GI78706832, Length=580, Percent_Identity=23.6206896551724, Blast_Score=80, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24581010, Length=580, Percent_Identity=23.6206896551724, Blast_Score=80, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011834
- InterPro:   IPR000811 [H]

Pfam domain/function: PF00343 Phosphorylase [H]

EC number: =2.4.1.1 [H]

Molecular weight: Translated: 98118; Mature: 98118

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS00102 PHOSPHORYLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGR
CCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEECHHHHHCCCCCCCHHHCC
VDQARLDELAKDDGFIAHMERAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSY
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH
CLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFAQYLNHDGWQQEEYPINDFYN
HHHHHCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHCC
MPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE
CCEEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHH
LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTF
HCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH
RHAQQFALSTQMFTTHTPVSAGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDL
HHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC
EAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFPRDEVGITSITNGVHARSVTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC
PATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFV
HCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCEEEEE
IAGKAHPKDIPGKELIRNIIHTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRP
EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHCCCHHEECCCCCC
REASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGHGEIYDDQDYQDRVEASALYE
CCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
LLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE
HHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCEEE
LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDD
CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCCCC
LAVQIYLGTINDQDELINGESYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHP
EEEEEEEECCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
HLDDATEPRLIRWA
CCCCCCCCCEEECC
>Mature Secondary Structure
MKPTHKFQVKAVLPPVLEPLRRLAHNIHWDWNVAAKSLFVRLDPDLWQQTSHNPVAMLGR
CCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEECCEEEEEEECHHHHHCCCCCCCHHHCC
VDQARLDELAKDDGFIAHMERAIEQLDDYLQQHTWYHKARGETKGKECYAYFCAEYGLSY
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHH
CLPIYSGGLGILAGDHLKSASDLGLPLVAVGLLYQEGYFAQYLNHDGWQQEEYPINDFYN
HHHHHCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCHHHCC
MPLHLEKDDQGNELIIEVEFPGRMIYARVWRIDVGTVPLYMLDTNIEQNTNPYDHDITDE
CCEEEECCCCCCEEEEEEECCCEEEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCHH
LYGGDRDLRLHQEILLGIGGVRMLEKLGYKPTVYHMNEGHSAFLILERIRKLMQEQGLTF
HCCCCCCHHHHHHHHHHCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCH
RHAQQFALSTQMFTTHTPVSAGFDLFSPEQTLHYVGHYAEKFGLSPDRFLGLGRENTGDL
HHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHEECCCCCCCCC
EAPFNMAIFALKHSAFINGVSQLHGQVSREMFHSLWPDFPRDEVGITSITNGVHARSVTA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCC
PATQDLYDRYLAPTWDEAPAESHIWEKVSTIPNEELWRNHERQRSDLVVYIRQHLAKQLQ
CCHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQGATEAAIAKARQVLKPNLLTIGFARRFATYKRANLFLYDIERIKKIILGNPERQVQFV
HCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCEEEEE
IAGKAHPKDIPGKELIRNIIHTVQEEGLEDYVVFLPNYNIHIARKMVSGCDVWLNTPRRP
EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHCCCHHEECCCCCC
REASGTSGMKAAMNGLPNLSVLDGWWDEADYTRTGWAIGHGEIYDDQDYQDRVEASALYE
CCCCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
LLEKEIVPLFYTRNSFDVPEGWVNKMKEAIRLNCPMFNTSRMLRDYAQKAYFKLSDRHFE
HHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHEEECCCEEE
LSDNHYQAVQELADWKSQLFKAWYNIRVEAFDVGESAEIDIQQPVHVKAILDLAALTPDD
CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEECCCCCHHHHHHHHHHCCCCC
LAVQIYLGTINDQDELINGESYPMTFQGLTTDQKAIYQGVVQYKKSGYQGMALRILPHHP
EEEEEEEECCCCHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
HLDDATEPRLIRWA
CCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]