Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078711

Identifier: 170078711

GI number: 170078711

Start: 2189412

End: 2189834

Strand: Reverse

Name: 170078711

Synonym: SYNPCC7002_A2110

Alternate gene names: NA

Gene position: 2189834-2189412 (Counterclockwise)

Preceding gene: 170078712

Following gene: 170078710

Centisome position: 72.8

GC content: 52.96

Gene sequence:

>423_bases
ATGAATTTCCATGACCATGACAACTTAATTCGGTTTTTAAAGAACCACGAACCCTACGGGCCACCGCCACCAGGGGATCA
CGAAGAAAGGCTTTTGGCACGACTCAACCAAACAGAACCGTCAAACCTGACAGCTTCGTCCCAGGGGAAATGGTGGGTTC
CGACAGTGGTTGCTGCCGGGTTTGTGCTCGTGGTTGGCCATGGACAACTGCACCAGGAATTTGGGACGCTGCCGGAGGTG
ATGCCGCAACAGTATTGGGGGAGAGTTGAACAACCCCAGCCACAGGCGATCGCCGGGGGAGCCGATGAAGAACTGGAGGC
CTTTCTTGAAGAAAGCTGGTCTTACTCCTTTGGGGAGCACCTTTACCAGGAACAGGAACTGTCCTACGAGTACGTTGATT
TTGTTGTCAATACTGATCCCTAG

Upstream 100 bases:

>100_bases
TGGCTGAAATTCTTGGGATTCCGCCAGGAACGGTGAAATCTCGCCTCCACCATGCCCGACGATCGCTGCGTCAGTTTTTA
GAAACCCAAGGAGTCAGTCT

Downstream 100 bases:

>100_bases
TGCTTCGCAAAACATTCCTAAATTTCAACACTGGGCTAATGCCGTCTTAGCGGAATCTGTGATTAGTTTTGGAGATGAAT
TTTAATCATGTTTAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV
MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP

Sequences:

>Translated_140_residues
MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV
MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP
>Mature_140_residues
MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAGFVLVVGHGQLHQEFGTLPEV
MPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEHLYQEQELSYEYVDFVVNTDP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15991; Mature: 15991

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAG
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCC
FVLVVGHGQLHQEFGTLPEVMPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEH
HHEEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
LYQEQELSYEYVDFVVNTDP
HHHHHHCCEEHHEEEECCCC
>Mature Secondary Structure
MNFHDHDNLIRFLKNHEPYGPPPPGDHEERLLARLNQTEPSNLTASSQGKWWVPTVVAAG
CCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHCC
FVLVVGHGQLHQEFGTLPEVMPQQYWGRVEQPQPQAIAGGADEELEAFLEESWSYSFGEH
HHEEECCCHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHH
LYQEQELSYEYVDFVVNTDP
HHHHHHCCEEHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA