Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078697

Identifier: 170078697

GI number: 170078697

Start: 2171726

End: 2172757

Strand: Direct

Name: 170078697

Synonym: SYNPCC7002_A2096

Alternate gene names: NA

Gene position: 2171726-2172757 (Clockwise)

Preceding gene: 170078690

Following gene: 170078701

Centisome position: 72.2

GC content: 50.87

Gene sequence:

>1032_bases
ATGGTCAAAGCAATTGAACAGGTTCGTCGAGATTTAGCCACCATTAGTGAGCGGGTAGTGGGGGTGCGTGAAGCCCTGAC
CAGCGCCTATGGCGATTACCTCAATTGCCTCGGAGATAGCCTCAAACGTCAATTGGTTCTCGCCAGTTACCAACTCTGCA
CCCAGATTTATCCTCAAAAGTTTTTGCAACTTTCCCATAGTCAGCGGCAAGCCCTACAACAGGAACTGCGTCAACTGGGG
ATCGATCTCCAGACACGCCTACACACCCTCCTAACAGAGCCAGAGGATGATCAGCCGAGTGAAGCGGAATCGGAAGTGAT
GGCCGAATTTTTCGTTGATGCTGGCGACATGGAAAATAGCGAGGATCTTGATCAAGAATTGTTTGAAGTTTTTGAAAGCC
TCGATCAGGCGATCGGCACCGATGAGCCGCCAGAAGACAAAATAGATAAAGATGATCAACTACCAGCCCAACTCGAAGAC
AAAGAAAAGCGGCGGGAATTGTCCCAGTTGGCAGAGCGCATCGCCGATAGTTTGGCCGAAATGATGCAGGGGCCTGCGGT
AGAGGTCTCCACCGATGAAAATAGCCCAGACTATTGGCTCGAATGGTGCAAAACCACTGAAAAACGTATTCGTCGCACCC
TTAACCAAGTCTCCCAAACGGTTAATCACCAGCTCCAGGGCGCCAAGATTCTCCCGGAAAATATCCCAACCACCGTCCTC
GATATGGCGATCCAAGCCGACAATCAACAGCATGGCGGTCAGATGCCGAGCCATTTAGTAAACGTCGTCATCGAAGCTGA
ACTAGGTAAAAAAAAGAAGAAGAGGAAGCACCGTACCCACCTAACCGCTGTGCACCTCAAAGTTTCAGAAGTCGAGTTTA
CGGAACCGGAAGTTTCGGCCCAGCGCCGCCGTCTCCGGGAACAAGTTGATAAGCTCCGTAATTTGCAAAAGTATTACCAA
AAGGCGAAACAGGATTTGGCGATCGCCGAAGCAGAGGCCGCCTGGCGCGCCAGTTGGTACGAAAATTCCTAG

Upstream 100 bases:

>100_bases
ATCCCAGACAATGAGACATCCCAAGGTTTGATTTTTGCAATCGTTATATCGTGAACAAGTCTCAGCGGACACCCGTACAC
CAATAAGATTTAGGAAGTGA

Downstream 100 bases:

>100_bases
GCGACTGGGGCGAATTTCCAGCTTAATTCCTGGCCAGCCCAAAGGGGCACAAGACTTGATTCCGGAAAAGGCAGCGCGTC
GGGAATCTGCCAAGGGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MVKAIEQVRRDLATISERVVGVREALTSAYGDYLNCLGDSLKRQLVLASYQLCTQIYPQKFLQLSHSQRQALQQELRQLG
IDLQTRLHTLLTEPEDDQPSEAESEVMAEFFVDAGDMENSEDLDQELFEVFESLDQAIGTDEPPEDKIDKDDQLPAQLED
KEKRRELSQLAERIADSLAEMMQGPAVEVSTDENSPDYWLEWCKTTEKRIRRTLNQVSQTVNHQLQGAKILPENIPTTVL
DMAIQADNQQHGGQMPSHLVNVVIEAELGKKKKKRKHRTHLTAVHLKVSEVEFTEPEVSAQRRRLREQVDKLRNLQKYYQ
KAKQDLAIAEAEAAWRASWYENS

Sequences:

>Translated_343_residues
MVKAIEQVRRDLATISERVVGVREALTSAYGDYLNCLGDSLKRQLVLASYQLCTQIYPQKFLQLSHSQRQALQQELRQLG
IDLQTRLHTLLTEPEDDQPSEAESEVMAEFFVDAGDMENSEDLDQELFEVFESLDQAIGTDEPPEDKIDKDDQLPAQLED
KEKRRELSQLAERIADSLAEMMQGPAVEVSTDENSPDYWLEWCKTTEKRIRRTLNQVSQTVNHQLQGAKILPENIPTTVL
DMAIQADNQQHGGQMPSHLVNVVIEAELGKKKKKRKHRTHLTAVHLKVSEVEFTEPEVSAQRRRLREQVDKLRNLQKYYQ
KAKQDLAIAEAEAAWRASWYENS
>Mature_343_residues
MVKAIEQVRRDLATISERVVGVREALTSAYGDYLNCLGDSLKRQLVLASYQLCTQIYPQKFLQLSHSQRQALQQELRQLG
IDLQTRLHTLLTEPEDDQPSEAESEVMAEFFVDAGDMENSEDLDQELFEVFESLDQAIGTDEPPEDKIDKDDQLPAQLED
KEKRRELSQLAERIADSLAEMMQGPAVEVSTDENSPDYWLEWCKTTEKRIRRTLNQVSQTVNHQLQGAKILPENIPTTVL
DMAIQADNQQHGGQMPSHLVNVVIEAELGKKKKKRKHRTHLTAVHLKVSEVEFTEPEVSAQRRRLREQVDKLRNLQKYYQ
KAKQDLAIAEAEAAWRASWYENS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39381; Mature: 39381

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKAIEQVRRDLATISERVVGVREALTSAYGDYLNCLGDSLKRQLVLASYQLCTQIYPQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLQLSHSQRQALQQELRQLGIDLQTRLHTLLTEPEDDQPSEAESEVMAEFFVDAGDMENS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
EDLDQELFEVFESLDQAIGTDEPPEDKIDKDDQLPAQLEDKEKRRELSQLAERIADSLAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MMQGPAVEVSTDENSPDYWLEWCKTTEKRIRRTLNQVSQTVNHQLQGAKILPENIPTTVL
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DMAIQADNQQHGGQMPSHLVNVVIEAELGKKKKKRKHRTHLTAVHLKVSEVEFTEPEVSA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHH
QRRRLREQVDKLRNLQKYYQKAKQDLAIAEAEAAWRASWYENS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKAIEQVRRDLATISERVVGVREALTSAYGDYLNCLGDSLKRQLVLASYQLCTQIYPQK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLQLSHSQRQALQQELRQLGIDLQTRLHTLLTEPEDDQPSEAESEVMAEFFVDAGDMENS
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCH
EDLDQELFEVFESLDQAIGTDEPPEDKIDKDDQLPAQLEDKEKRRELSQLAERIADSLAE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MMQGPAVEVSTDENSPDYWLEWCKTTEKRIRRTLNQVSQTVNHQLQGAKILPENIPTTVL
HHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH
DMAIQADNQQHGGQMPSHLVNVVIEAELGKKKKKRKHRTHLTAVHLKVSEVEFTEPEVSA
HHHHHCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHEEEEHHCCCCCHHHHH
QRRRLREQVDKLRNLQKYYQKAKQDLAIAEAEAAWRASWYENS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA