| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is modB [H]
Identifier: 170078690
GI number: 170078690
Start: 2165656
End: 2166357
Strand: Direct
Name: modB [H]
Synonym: SYNPCC7002_A2088
Alternate gene names: 170078690
Gene position: 2165656-2166357 (Clockwise)
Preceding gene: 170078689
Following gene: 170078697
Centisome position: 72.0
GC content: 51.28
Gene sequence:
>702_bases ATGTTCTCGCCTGAGGCGATCGCCGTTGTGTTGCCTGCCCTATGGATTTCCCTCAAGGTGGCCGGATTCGCCACAATTTT ATCGACGTTTTTTGGGGGAGGGTTGGCCTATGGCGTTGTGCGCTATCAGTTCTGGGGGAAATTTTGGCTAGAGGCGATCG CCACTTTACCGTTAGTGATGCCGCCCACCGTCGTTGGCTTCTATTTACTACAACTCTTGAGTCAACAGGGTTTACTGGGA TTCTGGTTAGATCAATGGTTGCAAATTCGCCTAATTTTTTCCTGGCAAGGGGCCACCATCGCGGCGACGGTCATGGCTCT GCCACTTATGTTTAAAACCACCAAAGCAGCCCTACAAAGCGTCAATCCTATTTATTTGGAGGCAGCGGCGACCCTGGGGC AATCGGAATGGCAAATTTTTTGGCGGGTGTGGCTGCCGTTGGCAAACCGTGGCGTTTTAGTGGGAATTTTGCTGAGTTTT ACCCGGGCTCTCGGTGAATTTGGCGCGACCTTGATGGTGGCTGGCAATATCCCTGGGTTAACCCAAACGATGCCCATGGC CATTTATGAAGCGGTGCAAACGGGAGACCAGACCCTTGCGGCCATATTTGTGGCGATTTTGACAGGGATTTCTTTCCTCA GCCTATTAATGACCCAATACCTAGAATCTCGCACCGCGACAAAACCACAGTTTTTCCGGTAA
Upstream 100 bases:
>100_bases AAAACGTGATTGAATTGACAATTTTCCGGCAAATCGAGATTTTTTCTGGGATTCTCCGCTGTTTTTTGAACTTTAAGCGC GTTTTGAGGTCTGGGGTTTG
Downstream 100 bases:
>100_bases TAATCCCTTGGGGAAGAAGAGAAAAAATTTATGATTTTTCTGGTCAAAGTGACTTAAAGATGCTAGATTTGTGTGAGTGT CTAAACCGCTTGCGGGTGTA
Product: molybdate ABC transporter, permease protein
Products: ADP; phosphate; MoO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MFSPEAIAVVLPALWISLKVAGFATILSTFFGGGLAYGVVRYQFWGKFWLEAIATLPLVMPPTVVGFYLLQLLSQQGLLG FWLDQWLQIRLIFSWQGATIAATVMALPLMFKTTKAALQSVNPIYLEAAATLGQSEWQIFWRVWLPLANRGVLVGILLSF TRALGEFGATLMVAGNIPGLTQTMPMAIYEAVQTGDQTLAAIFVAILTGISFLSLLMTQYLESRTATKPQFFR
Sequences:
>Translated_233_residues MFSPEAIAVVLPALWISLKVAGFATILSTFFGGGLAYGVVRYQFWGKFWLEAIATLPLVMPPTVVGFYLLQLLSQQGLLG FWLDQWLQIRLIFSWQGATIAATVMALPLMFKTTKAALQSVNPIYLEAAATLGQSEWQIFWRVWLPLANRGVLVGILLSF TRALGEFGATLMVAGNIPGLTQTMPMAIYEAVQTGDQTLAAIFVAILTGISFLSLLMTQYLESRTATKPQFFR >Mature_233_residues MFSPEAIAVVLPALWISLKVAGFATILSTFFGGGLAYGVVRYQFWGKFWLEAIATLPLVMPPTVVGFYLLQLLSQQGLLG FWLDQWLQIRLIFSWQGATIAATVMALPLMFKTTKAALQSVNPIYLEAAATLGQSEWQIFWRVWLPLANRGVLVGILLSF TRALGEFGATLMVAGNIPGLTQTMPMAIYEAVQTGDQTLAAIFVAILTGISFLSLLMTQYLESRTATKPQFFR
Specific function: could be part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4149
COG function: function code P; ABC-type molybdate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786980, Length=210, Percent_Identity=42.3809523809524, Blast_Score=137, Evalue=5e-34, Organism=Escherichia coli, GI1788764, Length=215, Percent_Identity=34.8837209302326, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI87082099, Length=221, Percent_Identity=30.7692307692308, Blast_Score=100, Evalue=6e-23, Organism=Escherichia coli, GI1787368, Length=213, Percent_Identity=30.0469483568075, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011867 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 25665; Mature: 25665
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSPEAIAVVLPALWISLKVAGFATILSTFFGGGLAYGVVRYQFWGKFWLEAIATLPLVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PPTVVGFYLLQLLSQQGLLGFWLDQWLQIRLIFSWQGATIAATVMALPLMFKTTKAALQS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHC VNPIYLEAAATLGQSEWQIFWRVWLPLANRGVLVGILLSFTRALGEFGATLMVAGNIPGL CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC TQTMPMAIYEAVQTGDQTLAAIFVAILTGISFLSLLMTQYLESRTATKPQFFR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFSPEAIAVVLPALWISLKVAGFATILSTFFGGGLAYGVVRYQFWGKFWLEAIATLPLVM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC PPTVVGFYLLQLLSQQGLLGFWLDQWLQIRLIFSWQGATIAATVMALPLMFKTTKAALQS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHC VNPIYLEAAATLGQSEWQIFWRVWLPLANRGVLVGILLSFTRALGEFGATLMVAGNIPGL CCHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCC TQTMPMAIYEAVQTGDQTLAAIFVAILTGISFLSLLMTQYLESRTATKPQFFR HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; MoO42- [Periplasm]; H2O [C]
Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9639930; 9384377 [H]