Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170078625

Identifier: 170078625

GI number: 170078625

Start: 2100830

End: 2102086

Strand: Reverse

Name: 170078625

Synonym: SYNPCC7002_A2021

Alternate gene names: NA

Gene position: 2102086-2100830 (Counterclockwise)

Preceding gene: 170078634

Following gene: 170078624

Centisome position: 69.88

GC content: 52.43

Gene sequence:

>1257_bases
ATGGACTTTTGCCAAGAATTCATCACCACCATCCATGATCTTGATGCCGATCTGGACTACCTCGAAAAACGCCTGATGAA
TCTTCGTGAAATTTGCCCCATGGCGTTACTCATTCCCTCACTTTATGAAGAACTTCAACGGCCTGCCCTCACTCGGATCA
AAGAGCATTTAAAAGGCTGTGCCTACATCCAAACCATCAATGTTTGTCTCCATGCCGAAACCGTCGAACAGTATCACCAT
GCCGTGACGTTTTTTCGTGAATTGCCCCAAAAGGTCAACGTCATTTGGACGAATGGAGCCCGGATTCGCGGCATTTTAGA
AAAGCTCGCCCAGCAAAATCTCAATCTCCTTGACTACATGGGCAAGGGCTGGGCGGTGTGGCTGGGCCTTGGTCTGGCGT
CCCTAGATGCCCGGGCGATCGCCCTCCATGATGCCGACATTGTCACCTTTGACCGTTCCCTGGTGGCCAAGCTGTTCTAT
CCTATCGTGGAGCCAGAATTCGGTATTGCCTACAACAAAGCCTATTACACCCGTCTCGGCCTCGAAACCCGAGCGATGAA
TGGCCGGGTTGTGCGTCTCTTCGTTGCGCCTCTGTTGGCAACCCTTGAAGACGTCCTGGGGCGCAATGCCTACCTCCACT
ACCTCAAATCCTACCGTTATCCCCTCGCCGGCGAATTTGCCATGACCGCAGATCTGGCCTTAAATTTGCGCGTTCCCTGT
GACTGGGGTATTGAGGTGGGGCTATTGGCAGAGGTTTATCGCAACGTAGCGCCGAAACGGGTGGCCCAGGTGGATCTGGG
GTTCTTTGACCACAAACACAAAGCCGTGGGCAACAATCCCCAAGAAGGGCTACAGAAAATGTGTACCGAAATTTTGTCTT
CGATCCTGCGTACCTTGACAGAAACGGAGTCAATTGTTTTCTCTGAAGGGCACCAAATCGCGCTCCAGGTGAAATTCCGC
CGCGTCGCCCAGGATATGATCCGTCAATATTTTGTCGATGCGACCTGTAACGGTATTCCCTACGATCGCCACCGGGAGGA
AATGACCGTCGAAAGCTTTGAACAGATCATTCCTTTAGCCTTTGATAAATATATGCACGAGCCGGCTGTGTACCGCATTC
CAGACTGGACAAGGGCCTTGGCTGTAATGCCTGACCTCCGGGAGCAACTGATGGCAGCGGTGGAAGCGGATATGGCAGAG
GTGCAGTTAGAGGCGACGATGCAGCGCTCGGAAATTCCCCCTTTGGAGATGGTTTAA

Upstream 100 bases:

>100_bases
TGTAGTGATTTTTACGTCGCTTTAGATACGGCCAACCCCCAAAAATTGGGTTACTTTAAAGGCAAATTTTAAGATTTTCT
TTTTATTTAGGTGACTAGCA

Downstream 100 bases:

>100_bases
CTCCCTAAGGCGATCGCCATTGCCGCAACAGATGATGGGGGGAGGATGCCGAAGGCCACCACAATCGATACAATCTTTAA
ACACAGTTGTCGCCCTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyltransferase-Like Protein; Glucosyl-3-Phosphoglycerate Synthase; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein

Number of amino acids: Translated: 418; Mature: 418

Protein sequence:

>418_residues
MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH
AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY
PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC
DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR
RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE
VQLEATMQRSEIPPLEMV

Sequences:

>Translated_418_residues
MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH
AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY
PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC
DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR
RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE
VQLEATMQRSEIPPLEMV
>Mature_418_residues
MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH
AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY
PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC
DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR
RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE
VQLEATMQRSEIPPLEMV

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47896; Mature: 47896

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGC
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
AYIQTINVCLHAETVEQYHHAVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHCCCCHHHHC
GKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFYPIVEPEFGIAYNKAYYTRLG
CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHC
LETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC
CEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCC
DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLT
CCCCCHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETESIVFSEGHQIALQVKFRRVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLA
HHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
FDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAEVQLEATMQRSEIPPLEMV
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGC
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
AYIQTINVCLHAETVEQYHHAVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHCCCCHHHHC
GKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFYPIVEPEFGIAYNKAYYTRLG
CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHC
LETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC
CEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCC
DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLT
CCCCCHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH
ETESIVFSEGHQIALQVKFRRVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLA
HHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
FDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAEVQLEATMQRSEIPPLEMV
HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA