| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078625
Identifier: 170078625
GI number: 170078625
Start: 2100830
End: 2102086
Strand: Reverse
Name: 170078625
Synonym: SYNPCC7002_A2021
Alternate gene names: NA
Gene position: 2102086-2100830 (Counterclockwise)
Preceding gene: 170078634
Following gene: 170078624
Centisome position: 69.88
GC content: 52.43
Gene sequence:
>1257_bases ATGGACTTTTGCCAAGAATTCATCACCACCATCCATGATCTTGATGCCGATCTGGACTACCTCGAAAAACGCCTGATGAA TCTTCGTGAAATTTGCCCCATGGCGTTACTCATTCCCTCACTTTATGAAGAACTTCAACGGCCTGCCCTCACTCGGATCA AAGAGCATTTAAAAGGCTGTGCCTACATCCAAACCATCAATGTTTGTCTCCATGCCGAAACCGTCGAACAGTATCACCAT GCCGTGACGTTTTTTCGTGAATTGCCCCAAAAGGTCAACGTCATTTGGACGAATGGAGCCCGGATTCGCGGCATTTTAGA AAAGCTCGCCCAGCAAAATCTCAATCTCCTTGACTACATGGGCAAGGGCTGGGCGGTGTGGCTGGGCCTTGGTCTGGCGT CCCTAGATGCCCGGGCGATCGCCCTCCATGATGCCGACATTGTCACCTTTGACCGTTCCCTGGTGGCCAAGCTGTTCTAT CCTATCGTGGAGCCAGAATTCGGTATTGCCTACAACAAAGCCTATTACACCCGTCTCGGCCTCGAAACCCGAGCGATGAA TGGCCGGGTTGTGCGTCTCTTCGTTGCGCCTCTGTTGGCAACCCTTGAAGACGTCCTGGGGCGCAATGCCTACCTCCACT ACCTCAAATCCTACCGTTATCCCCTCGCCGGCGAATTTGCCATGACCGCAGATCTGGCCTTAAATTTGCGCGTTCCCTGT GACTGGGGTATTGAGGTGGGGCTATTGGCAGAGGTTTATCGCAACGTAGCGCCGAAACGGGTGGCCCAGGTGGATCTGGG GTTCTTTGACCACAAACACAAAGCCGTGGGCAACAATCCCCAAGAAGGGCTACAGAAAATGTGTACCGAAATTTTGTCTT CGATCCTGCGTACCTTGACAGAAACGGAGTCAATTGTTTTCTCTGAAGGGCACCAAATCGCGCTCCAGGTGAAATTCCGC CGCGTCGCCCAGGATATGATCCGTCAATATTTTGTCGATGCGACCTGTAACGGTATTCCCTACGATCGCCACCGGGAGGA AATGACCGTCGAAAGCTTTGAACAGATCATTCCTTTAGCCTTTGATAAATATATGCACGAGCCGGCTGTGTACCGCATTC CAGACTGGACAAGGGCCTTGGCTGTAATGCCTGACCTCCGGGAGCAACTGATGGCAGCGGTGGAAGCGGATATGGCAGAG GTGCAGTTAGAGGCGACGATGCAGCGCTCGGAAATTCCCCCTTTGGAGATGGTTTAA
Upstream 100 bases:
>100_bases TGTAGTGATTTTTACGTCGCTTTAGATACGGCCAACCCCCAAAAATTGGGTTACTTTAAAGGCAAATTTTAAGATTTTCT TTTTATTTAGGTGACTAGCA
Downstream 100 bases:
>100_bases CTCCCTAAGGCGATCGCCATTGCCGCAACAGATGATGGGGGGAGGATGCCGAAGGCCACCACAATCGATACAATCTTTAA ACACAGTTGTCGCCCTTACT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycosyltransferase; Glycosyltransferase-Like Protein; Glucosyl-3-Phosphoglycerate Synthase; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 2 Family; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE VQLEATMQRSEIPPLEMV
Sequences:
>Translated_418_residues MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE VQLEATMQRSEIPPLEMV >Mature_418_residues MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGCAYIQTINVCLHAETVEQYHH AVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYMGKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFY PIVEPEFGIAYNKAYYTRLGLETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLTETESIVFSEGHQIALQVKFR RVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLAFDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAE VQLEATMQRSEIPPLEMV
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47896; Mature: 47896
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGC CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH AYIQTINVCLHAETVEQYHHAVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHCCCCHHHHC GKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFYPIVEPEFGIAYNKAYYTRLG CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHC LETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC CEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCC DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLT CCCCCHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH ETESIVFSEGHQIALQVKFRRVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLA HHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAEVQLEATMQRSEIPPLEMV HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MDFCQEFITTIHDLDADLDYLEKRLMNLREICPMALLIPSLYEELQRPALTRIKEHLKGC CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHH AYIQTINVCLHAETVEQYHHAVTFFRELPQKVNVIWTNGARIRGILEKLAQQNLNLLDYM HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHCCCCHHHHC GKGWAVWLGLGLASLDARAIALHDADIVTFDRSLVAKLFYPIVEPEFGIAYNKAYYTRLG CCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCEECHHHHHHHC LETRAMNGRVVRLFVAPLLATLEDVLGRNAYLHYLKSYRYPLAGEFAMTADLALNLRVPC CEEECCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHEEEEEEEEEECCC DWGIEVGLLAEVYRNVAPKRVAQVDLGFFDHKHKAVGNNPQEGLQKMCTEILSSILRTLT CCCCCHHHHHHHHHCCCHHHHHHHHCCHHCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHH ETESIVFSEGHQIALQVKFRRVAQDMIRQYFVDATCNGIPYDRHREEMTVESFEQIIPLA HHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH FDKYMHEPAVYRIPDWTRALAVMPDLREQLMAAVEADMAEVQLEATMQRSEIPPLEMV HHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA