| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is purT [H]
Identifier: 170078634
GI number: 170078634
Start: 2111125
End: 2112312
Strand: Reverse
Name: purT [H]
Synonym: SYNPCC7002_A2030
Alternate gene names: 170078634
Gene position: 2112312-2111125 (Counterclockwise)
Preceding gene: 170078635
Following gene: 170078625
Centisome position: 70.22
GC content: 53.03
Gene sequence:
>1188_bases ATGGCGATCGCATTACCGAAAAAAATCATGTTGTTGGGCTCTGGGGAACTGGGTAAAGAAGTGGCGATCGCCGCCCAACG TTTAGGCAATACCGTGATCGCTGTGGATCGCTATGACAACGCCCCGGCAATGCAGGTGGCCGACCAACGGGAAGTCATCT CTATGCTTGATGGGGTAGCCCTCGAAGCGGTGATCAAAAAACATCAACCGGATCTGATCGTGCCGGAAGTAGAAGCCATC CGCACCGAAAAACTCATCGAATTAGAACAGCAAGGCTATACCGTTATCCCCACCGCCGCCGCCACCAACTTCACCATGAA CCGCGATCGCATCCGGGATCTTGCCAGCGAAGAATTAGGCCTGCGTACTGCCAAATATGCCTATGCCACCAACCTCGCAG AACTCAAAACCGTCGCCCAGGACATCGGCTTTCCCAACGTGATCAAGCCCGTAATGTCCTCCTCTGGTAAAGGGCAATCC GTGGTACAAACTGCCGACGAATTAGAAGCCGCCTGGAATTACGCCATTGAGGGGGCCAGGGGTGACACCGCCAAAATTAT CATCGAAGAATTTATCGATTTCGAGGTAGAAATCACCCTCCTCACCATCCGCCAATGGGCAGGAGAAACCCTCTTTTGTC CGGCGATCGCCCACCGCCAAGAGCGGGGTGACTACCAAGAATCCTGGCAGCCCGTTGGTTTAACCGCAGCCCAAGTAAAA GATGCCCAGGACATTGCCCGGAAAGTTACCGATAAACTCGGGGGCGCTGGCATTTTTGGGGTCGAGTTTTTTATCACCAA AGATGAAGTAATTTTTTCGGAATTGTCTCCCCGGCCCCACGATACGGGCATGGTGACGCTCATTTCCCAAAACCTGAATG AATTTGAACTCCATCTCCGGGCGATCTTGGGTCTACCGATTCCTACCATTGAATTGCTGAGTCCGGCGGCCAGTGCAGTG ATTCTCGCTGAGAAAAATAGCGATCAAATTATGTTTACTGGTGTTGCAGCAGCCTTGGCTATCCCAGACACCGACCTCCG TTTATTTGGTAAGCCCGATTCTCGTCCCTACCGTCGCATGGGGGTCGCCCTCGCCAAGGGGAAAGATGCTACCGAAGCTC GTCAAAAGGCAACGACGGCAGCAGCCACAATCAAAATTACTGCAACAGCTCCTCACCCGAGCCATTGA
Upstream 100 bases:
>100_bases TTTCCTCTCAGCCCGACAAAAACCCAAGGCCTGGCGGGGGCGCGTGTACAGCTAAAAACGGTATGATATCTCTGTTTTGT TCTTGGCAATAGGTGAAAAA
Downstream 100 bases:
>100_bases GGATTAAAAAAGATCAACAGGACCAAAGGAATCGACTTCTTCTAGTCCCTCGTTGAACGATAAATAAACGTAAGGAAAAA GACGTGCTGGTGGGCAATGT
Product: phosphoribosylglycinamide formyltransferase 2
Products: 5'-Phosphoribosyl-N-Formylglycinamide; Pyrophosphate; acetylphosphate; ADP [C]
Alternate protein names: GART 2; 5'-phosphoribosylglycinamide transformylase 2; Formate-dependent GAR transformylase; GAR transformylase 2 [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MAIALPKKIMLLGSGELGKEVAIAAQRLGNTVIAVDRYDNAPAMQVADQREVISMLDGVALEAVIKKHQPDLIVPEVEAI RTEKLIELEQQGYTVIPTAAATNFTMNRDRIRDLASEELGLRTAKYAYATNLAELKTVAQDIGFPNVIKPVMSSSGKGQS VVQTADELEAAWNYAIEGARGDTAKIIIEEFIDFEVEITLLTIRQWAGETLFCPAIAHRQERGDYQESWQPVGLTAAQVK DAQDIARKVTDKLGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLRAILGLPIPTIELLSPAASAV ILAEKNSDQIMFTGVAAALAIPDTDLRLFGKPDSRPYRRMGVALAKGKDATEARQKATTAAATIKITATAPHPSH
Sequences:
>Translated_395_residues MAIALPKKIMLLGSGELGKEVAIAAQRLGNTVIAVDRYDNAPAMQVADQREVISMLDGVALEAVIKKHQPDLIVPEVEAI RTEKLIELEQQGYTVIPTAAATNFTMNRDRIRDLASEELGLRTAKYAYATNLAELKTVAQDIGFPNVIKPVMSSSGKGQS VVQTADELEAAWNYAIEGARGDTAKIIIEEFIDFEVEITLLTIRQWAGETLFCPAIAHRQERGDYQESWQPVGLTAAQVK DAQDIARKVTDKLGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLRAILGLPIPTIELLSPAASAV ILAEKNSDQIMFTGVAAALAIPDTDLRLFGKPDSRPYRRMGVALAKGKDATEARQKATTAAATIKITATAPHPSH >Mature_394_residues AIALPKKIMLLGSGELGKEVAIAAQRLGNTVIAVDRYDNAPAMQVADQREVISMLDGVALEAVIKKHQPDLIVPEVEAIR TEKLIELEQQGYTVIPTAAATNFTMNRDRIRDLASEELGLRTAKYAYATNLAELKTVAQDIGFPNVIKPVMSSSGKGQSV VQTADELEAAWNYAIEGARGDTAKIIIEEFIDFEVEITLLTIRQWAGETLFCPAIAHRQERGDYQESWQPVGLTAAQVKD AQDIARKVTDKLGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLRAILGLPIPTIELLSPAASAVI LAEKNSDQIMFTGVAAALAIPDTDLRLFGKPDSRPYRRMGVALAKGKDATEARQKATTAAATIKITATAPHPSH
Specific function: Catalyzes two reactions:the first one is the production of beta-formyl glycinamide ribonucleotide (GAR) from formate, ATP and beta GAR; the second, a side reaction, is the production of acetyl phosphate and ADP from acetate and ATP [H]
COG id: COG0027
COG function: function code F; Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1788155, Length=379, Percent_Identity=53.2981530343008, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1786733, Length=360, Percent_Identity=26.1111111111111, Blast_Score=82, Evalue=8e-17, Organism=Saccharomyces cerevisiae, GI6324702, Length=367, Percent_Identity=23.7057220708447, Blast_Score=106, Evalue=7e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR003135 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR005862 - InterPro: IPR011054 [H]
Pfam domain/function: PF02222 ATP-grasp [H]
EC number: 2.1.2.- [C]
Molecular weight: Translated: 42881; Mature: 42749
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIALPKKIMLLGSGELGKEVAIAAQRLGNTVIAVDRYDNAPAMQVADQREVISMLDGVA CCCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LEAVIKKHQPDLIVPEVEAIRTEKLIELEQQGYTVIPTAAATNFTMNRDRIRDLASEELG HHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCHHHHHHHHHHHHC LRTAKYAYATNLAELKTVAQDIGFPNVIKPVMSSSGKGQSVVQTADELEAAWNYAIEGAR CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCC GDTAKIIIEEFIDFEVEITLLTIRQWAGETLFCPAIAHRQERGDYQESWQPVGLTAAQVK CCHHHHHHHHHCCCEEEEEEEEEEHHCCCEEECHHHHHHHHCCCHHHCCCCCCCCHHHHH DAQDIARKVTDKLGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLR HHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHH AILGLPIPTIELLSPAASAVILAEKNSDQIMFTGVAAALAIPDTDLRLFGKPDSRPYRRM HHHCCCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEHEEECCCCCEEEECCCCCCHHHHH GVALAKGKDATEARQKATTAAATIKITATAPHPSH CCHHCCCCCHHHHHHHHHHEEEEEEEEEECCCCCC >Mature Secondary Structure AIALPKKIMLLGSGELGKEVAIAAQRLGNTVIAVDRYDNAPAMQVADQREVISMLDGVA CCCCCCEEEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH LEAVIKKHQPDLIVPEVEAIRTEKLIELEQQGYTVIPTAAATNFTMNRDRIRDLASEELG HHHHHHHCCCCEECCCHHHHHHHHHHHHHHCCCEEEECCCCCCEECCHHHHHHHHHHHHC LRTAKYAYATNLAELKTVAQDIGFPNVIKPVMSSSGKGQSVVQTADELEAAWNYAIEGAR CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEECCC GDTAKIIIEEFIDFEVEITLLTIRQWAGETLFCPAIAHRQERGDYQESWQPVGLTAAQVK CCHHHHHHHHHCCCEEEEEEEEEEHHCCCEEECHHHHHHHHCCCHHHCCCCCCCCHHHHH DAQDIARKVTDKLGGAGIFGVEFFITKDEVIFSELSPRPHDTGMVTLISQNLNEFELHLR HHHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHH AILGLPIPTIELLSPAASAVILAEKNSDQIMFTGVAAALAIPDTDLRLFGKPDSRPYRRM HHHCCCCCHHHHHCCCCCEEEEEECCCCEEEEEEEEHEEECCCCCEEEECCCCCCHHHHH GVALAKGKDATEARQKATTAAATIKITATAPHPSH CCHHCCCCCHHHHHHHHHHEEEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Formate; 5'-Phospho-Ribosylglycinamide; acetate; ATP [C]
Specific reaction: Formate + ATP + 5'-Phospho-Ribosylglycinamide = 5'-Phosphoribosyl-N-Formylglycinamide + ADP + Pyrophosphate. acetate + ATP = acetylphosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA