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The map label for this gene is yrkF [H]

Identifier: 170078606

GI number: 170078606

Start: 2081253

End: 2081609

Strand: Direct

Name: yrkF [H]

Synonym: SYNPCC7002_A2002

Alternate gene names: 170078606

Gene position: 2081253-2081609 (Clockwise)

Preceding gene: 170078601

Following gene: 170078607

Centisome position: 69.19

GC content: 51.26

Gene sequence:

>357_bases
ATGACCGACCCTAGTTCTAACCCACAACTCCAGGCCATCAGTCCCACGGTGTTTGCCCAGCGCGTCGCCACGACCGAATC
TTTGCAACTCATTGATGTGCGTGAGCCCGATGAGCTAGAGATTGTCGCTCTCCCAGGCTTTACCAATTTACCCCTGAGTC
AATTTGAACAATGGGCTGCCCGCATTGCTGTGGACTTTGACCCCCAGGCAGAAACCTATGTGCTTTGTCACCATGGTGTG
CGTTCGGCACAAATGTGTTACTGGCTGCAACAACAAGGTTTTACCCAAGTGATTAATATTGAAGGTGGGATTCACCTTTA
CACCCTCTCTGTGGATCAAAGCCTACCGCGCTACTAG

Upstream 100 bases:

>100_bases
TAAGGTGAAGATCCCCTAGCAATTCAGCCTTGGCATTCCCAAACGCAGCCAGAAAATGCTAGAAATGCTCACCTCTTAAT
TTTTTATCAGTAGCTTGACC

Downstream 100 bases:

>100_bases
GGAAGAATGAGCTATACTAACCCAAACTTAGACCTTAAATCTTTCTTAAGTTAAGCGAAGTTTTTTTACTATTTTTTTAT
ATTTCTTAGTTATTGAAAGC

Product: rhodanese-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MTDPSSNPQLQAISPTVFAQRVATTESLQLIDVREPDELEIVALPGFTNLPLSQFEQWAARIAVDFDPQAETYVLCHHGV
RSAQMCYWLQQQGFTQVINIEGGIHLYTLSVDQSLPRY

Sequences:

>Translated_118_residues
MTDPSSNPQLQAISPTVFAQRVATTESLQLIDVREPDELEIVALPGFTNLPLSQFEQWAARIAVDFDPQAETYVLCHHGV
RSAQMCYWLQQQGFTQVINIEGGIHLYTLSVDQSLPRY
>Mature_117_residues
TDPSSNPQLQAISPTVFAQRVATTESLQLIDVREPDELEIVALPGFTNLPLSQFEQWAARIAVDFDPQAETYVLCHHGVR
SAQMCYWLQQQGFTQVINIEGGIHLYTLSVDQSLPRY

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763
- InterPro:   IPR001455 [H]

Pfam domain/function: PF00581 Rhodanese; PF01206 SirA [H]

EC number: NA

Molecular weight: Translated: 13292; Mature: 13161

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPSSNPQLQAISPTVFAQRVATTESLQLIDVREPDELEIVALPGFTNLPLSQFEQWAA
CCCCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
RIAVDFDPQAETYVLCHHGVRSAQMCYWLQQQGFTQVINIEGGIHLYTLSVDQSLPRY
EEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCC
>Mature Secondary Structure 
TDPSSNPQLQAISPTVFAQRVATTESLQLIDVREPDELEIVALPGFTNLPLSQFEQWAA
CCCCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCHHHHHHHHH
RIAVDFDPQAETYVLCHHGVRSAQMCYWLQQQGFTQVINIEGGIHLYTLSVDQSLPRY
EEEEEECCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]