Click here to switch to the map view.

The map label for this gene is hrcA [H]

Identifier: 170078607

GI number: 170078607

Start: 2081724

End: 2082770

Strand: Direct

Name: hrcA [H]

Synonym: SYNPCC7002_A2003

Alternate gene names: 170078607

Gene position: 2081724-2082770 (Clockwise)

Preceding gene: 170078606

Following gene: 170078608

Centisome position: 69.21

GC content: 48.52

Gene sequence:

>1047_bases
ATGGTTGCTCAGAAAATTCTTAATCCCCGTCACCAAAATATTTTTCGAGCAACGGTCAACCATTACATTTCCACAGCGGA
ACCCGTAGGCTCCAAAACCCTTGTGGAGGAATATGACTTCCAGGTCAGTTCTGCCACCATTCGTAATGTGATGGGCAAGT
TGGAAAAGGCAGGTTTCTTGTATCAACCCCACATCTCGGCGGGACGGGTCCCCTCTGATTCCGGCTATCGTCTCTATGTG
GACGAACTCGTCACCCCCAATTCCCAGACCCGTAAACGAGCGAGCCAAACGTTACAGGAACAGACTGTTGCAGAGTATTG
GGGACTAGAAGCGACCCTCCAGCGGGCAACGCAAATTTTGGCGACGTTAAGTGGTTATATTGCTCTAATCACGGTGCCCC
ATCAAAACCATGCTCGCCTACGCTATCTACAGTTACTCCCCCTAGGGGATCAGAAGGTGATGATGATTGTGGTGACGGAT
AGTTATCAACCCCAATCGTTGTCCTTGACCCTGGACTGTGACCCCGATGAGCTAGAGATTCTATCGAATTTTTTAAATCA
CCATCTCCAAGGGCGATCGCTCCAAGAAATTGCCAGCCTTGATCCCCAGACTTTAGATGAAGACTTTCACCATTGTCAGC
TGTTATTGGAGACGATTTTGGGTAAGATTGCTCAGATTGTGCCTCATACGATTGCGACACCAATTCTGGTACGGGGCATT
TCGGAAGTGCTGCGTCAACCTGAGTTTTCCCAAATTGAGCAGTTACAAACCCTATTGCACTTGCTAGAGGCGAAACAAGA
ACAGCTACTCCCGGTGGTTTTTAGCGGTTTACCAGGCGATCGCCCGACGCTCATTCACATCGGCACCGAAAATCCCCTAG
AACCCATGAAAACCTGCGCCCTTATTTCCACATATTATTACCAAGAAAAAACGCCCGTTGGCAGTGTTGCGGTGCTTGGC
CCGACGCGGATGTTCTATGAAAATGCGATCGCCTTAGTTGAAGCCACAGCAGATTATCTGTCTGAGAATTTAAAAGCCGC
TTTTTAA

Upstream 100 bases:

>100_bases
TACTAACCCAAACTTAGACCTTAAATCTTTCTTAAGTTAAGCGAAGTTTTTTTACTATTTTTTTATATTTCTTAGTTATT
GAAAGCACTACTGTCGGCGT

Downstream 100 bases:

>100_bases
GGTTTAAGAATCGTAGAAAATAAGGATCAAATAATTCAATTTTTTGTTTTTTTGTTGATGGCGATCGCCACAATCTTTTT
AGGGGAGTACCCATAGGGGA

Product: heat-inducible transcription repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MVAQKILNPRHQNIFRATVNHYISTAEPVGSKTLVEEYDFQVSSATIRNVMGKLEKAGFLYQPHISAGRVPSDSGYRLYV
DELVTPNSQTRKRASQTLQEQTVAEYWGLEATLQRATQILATLSGYIALITVPHQNHARLRYLQLLPLGDQKVMMIVVTD
SYQPQSLSLTLDCDPDELEILSNFLNHHLQGRSLQEIASLDPQTLDEDFHHCQLLLETILGKIAQIVPHTIATPILVRGI
SEVLRQPEFSQIEQLQTLLHLLEAKQEQLLPVVFSGLPGDRPTLIHIGTENPLEPMKTCALISTYYYQEKTPVGSVAVLG
PTRMFYENAIALVEATADYLSENLKAAF

Sequences:

>Translated_348_residues
MVAQKILNPRHQNIFRATVNHYISTAEPVGSKTLVEEYDFQVSSATIRNVMGKLEKAGFLYQPHISAGRVPSDSGYRLYV
DELVTPNSQTRKRASQTLQEQTVAEYWGLEATLQRATQILATLSGYIALITVPHQNHARLRYLQLLPLGDQKVMMIVVTD
SYQPQSLSLTLDCDPDELEILSNFLNHHLQGRSLQEIASLDPQTLDEDFHHCQLLLETILGKIAQIVPHTIATPILVRGI
SEVLRQPEFSQIEQLQTLLHLLEAKQEQLLPVVFSGLPGDRPTLIHIGTENPLEPMKTCALISTYYYQEKTPVGSVAVLG
PTRMFYENAIALVEATADYLSENLKAAF
>Mature_348_residues
MVAQKILNPRHQNIFRATVNHYISTAEPVGSKTLVEEYDFQVSSATIRNVMGKLEKAGFLYQPHISAGRVPSDSGYRLYV
DELVTPNSQTRKRASQTLQEQTVAEYWGLEATLQRATQILATLSGYIALITVPHQNHARLRYLQLLPLGDQKVMMIVVTD
SYQPQSLSLTLDCDPDELEILSNFLNHHLQGRSLQEIASLDPQTLDEDFHHCQLLLETILGKIAQIVPHTIATPILVRGI
SEVLRQPEFSQIEQLQTLLHLLEAKQEQLLPVVFSGLPGDRPTLIHIGTENPLEPMKTCALISTYYYQEKTPVGSVAVLG
PTRMFYENAIALVEATADYLSENLKAAF

Specific function: Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons [H]

COG id: COG1420

COG function: function code K; Transcriptional regulator of heat shock gene

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hrcA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002571
- InterPro:   IPR021153
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01628 HrcA [H]

EC number: NA

Molecular weight: Translated: 38996; Mature: 38996

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAQKILNPRHQNIFRATVNHYISTAEPVGSKTLVEEYDFQVSSATIRNVMGKLEKAGFL
CCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCE
YQPHISAGRVPSDSGYRLYVDELVTPNSQTRKRASQTLQEQTVAEYWGLEATLQRATQIL
ECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ATLSGYIALITVPHQNHARLRYLQLLPLGDQKVMMIVVTDSYQPQSLSLTLDCDPDELEI
HHHCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHH
LSNFLNHHLQGRSLQEIASLDPQTLDEDFHHCQLLLETILGKIAQIVPHTIATPILVRGI
HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVLRQPEFSQIEQLQTLLHLLEAKQEQLLPVVFSGLPGDRPTLIHIGTENPLEPMKTCA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
LISTYYYQEKTPVGSVAVLGPTRMFYENAIALVEATADYLSENLKAAF
HHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVAQKILNPRHQNIFRATVNHYISTAEPVGSKTLVEEYDFQVSSATIRNVMGKLEKAGFL
CCCHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCE
YQPHISAGRVPSDSGYRLYVDELVTPNSQTRKRASQTLQEQTVAEYWGLEATLQRATQIL
ECCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
ATLSGYIALITVPHQNHARLRYLQLLPLGDQKVMMIVVTDSYQPQSLSLTLDCDPDELEI
HHHCCCEEEEEECCCCCCCEEEEEEEECCCCEEEEEEEECCCCCCEEEEEEECCCHHHHH
LSNFLNHHLQGRSLQEIASLDPQTLDEDFHHCQLLLETILGKIAQIVPHTIATPILVRGI
HHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEVLRQPEFSQIEQLQTLLHLLEAKQEQLLPVVFSGLPGDRPTLIHIGTENPLEPMKTCA
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHH
LISTYYYQEKTPVGSVAVLGPTRMFYENAIALVEATADYLSENLKAAF
HHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA