| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is acsF [H]
Identifier: 170078596
GI number: 170078596
Start: 2073645
End: 2074721
Strand: Reverse
Name: acsF [H]
Synonym: SYNPCC7002_A1992
Alternate gene names: 170078596
Gene position: 2074721-2073645 (Counterclockwise)
Preceding gene: 170078598
Following gene: 170078595
Centisome position: 68.97
GC content: 47.08
Gene sequence:
>1077_bases ATGGTTACGCTCACTGACCAGCCGAGTCCAGAACTTCTCAGACCAGGGGTTAAAAAACCAGTTCAAGAAACCCTCCTAAC ACCCCGCTTTTACACCACAGATTTCGATAAAATTGCCAACATGGTGCTCTCTTCCCATGAGGAAGAAATTTTGGCTGCCC TCGAAGAATTGCGGGCCGATTATAACCGCAACCATTTCATCCGTGACGAAAGTTTTGAGCAATCTTGGGATCATTTTGAT GAAAAAACTCGCAGTATTTTCATTGACTTTTTAGAACGTTCTTGTACTTCTGAGTTTTCTGGCTTTCTTTTATTTAAAGA GCTTTCCCGCCGCCTCCGCGATCGCAGCCCGATTTTGGCCGAAGCTTTTCACCTGCTGGCCCGGGACGAGGCACGCCATG CGGGATTTATCAACAAATCAATGGTGGATTTTGGTCTCTGTTTAGACCTGAAATATCTCACCCAAAAACGAACCTATACT TTCTTTCCGCCGGAGTGGGTAATTTATACCGTTTACCTGTCAGAAAAGATTGGCTATTGGCGTTATATCCTCGTGTATCG CCACCTGGAGAAACACCCAGAACACAATATTTATCCGCTGTTTAAGTATTTTGAAAGCTGGTGCCAGGACGAAAACCGCC ACGGAGACTTTTTTAAAGCCCTATTGCGATCGCAAAAATCCCTGTGGAAAACTTGGCAATCTCGCTTGTGGTCGCGCTTT TTCTTGTTAACGGTATTTGTCACCCATTCCCTGACAACCCTGGAACGGTCTGACTTTTACGAGATGATTGGCCTTGATGC CCACCAATACAATCGGGACGTGATTCGCAACACCAACGAAACGTCTCTACGGGCTTTCCCGGAAGTGCTCGACACAAACC ATCCGCAGTTTTTCACCCGCCTAGAAGCCTGCGCCGCCGCCAATGAACACCTAAAGGCGATCGCCACCAACGGCAACCCC AAAGTGATTCAGTTTTTCCAAAAAATCCCCTGGATTATCAACATTGTTTGGCATATGGCTTTGATTTTCTTCACCAAGCC TGTGGATGCCGAAGCCCTACGGGCCGAGGTTCACTAA
Upstream 100 bases:
>100_bases AGGTAACTATAGGCTAGCCGGAGAAACCCTCTTGAAACTTCAGGATAATTCCGAAAAGATGAGTCCCAGAAAGATTTAAA AAACACCTTTTAATCAGCCT
Downstream 100 bases:
>100_bases AAATTCCCCTCAGTATTTTTCCGCTTATTTACCCCATGGAGTAGCCATGACGACCCTATCCCAACGCCTCCGCTTTGGTA CCCAAACCTCCCATACCCTC
Product: magnesium-protoporphyrin IX monomethyl ester cyclase
Products: NA
Alternate protein names: Mg-protoporphyrin IX monomethyl ester oxidative cyclase 2 [H]
Number of amino acids: Translated: 358; Mature: 358
Protein sequence:
>358_residues MVTLTDQPSPELLRPGVKKPVQETLLTPRFYTTDFDKIANMVLSSHEEEILAALEELRADYNRNHFIRDESFEQSWDHFD EKTRSIFIDFLERSCTSEFSGFLLFKELSRRLRDRSPILAEAFHLLARDEARHAGFINKSMVDFGLCLDLKYLTQKRTYT FFPPEWVIYTVYLSEKIGYWRYILVYRHLEKHPEHNIYPLFKYFESWCQDENRHGDFFKALLRSQKSLWKTWQSRLWSRF FLLTVFVTHSLTTLERSDFYEMIGLDAHQYNRDVIRNTNETSLRAFPEVLDTNHPQFFTRLEACAAANEHLKAIATNGNP KVIQFFQKIPWIINIVWHMALIFFTKPVDAEALRAEVH
Sequences:
>Translated_358_residues MVTLTDQPSPELLRPGVKKPVQETLLTPRFYTTDFDKIANMVLSSHEEEILAALEELRADYNRNHFIRDESFEQSWDHFD EKTRSIFIDFLERSCTSEFSGFLLFKELSRRLRDRSPILAEAFHLLARDEARHAGFINKSMVDFGLCLDLKYLTQKRTYT FFPPEWVIYTVYLSEKIGYWRYILVYRHLEKHPEHNIYPLFKYFESWCQDENRHGDFFKALLRSQKSLWKTWQSRLWSRF FLLTVFVTHSLTTLERSDFYEMIGLDAHQYNRDVIRNTNETSLRAFPEVLDTNHPQFFTRLEACAAANEHLKAIATNGNP KVIQFFQKIPWIINIVWHMALIFFTKPVDAEALRAEVH >Mature_358_residues MVTLTDQPSPELLRPGVKKPVQETLLTPRFYTTDFDKIANMVLSSHEEEILAALEELRADYNRNHFIRDESFEQSWDHFD EKTRSIFIDFLERSCTSEFSGFLLFKELSRRLRDRSPILAEAFHLLARDEARHAGFINKSMVDFGLCLDLKYLTQKRTYT FFPPEWVIYTVYLSEKIGYWRYILVYRHLEKHPEHNIYPLFKYFESWCQDENRHGDFFKALLRSQKSLWKTWQSRLWSRF FLLTVFVTHSLTTLERSDFYEMIGLDAHQYNRDVIRNTNETSLRAFPEVLDTNHPQFFTRLEACAAANEHLKAIATNGNP KVIQFFQKIPWIINIVWHMALIFFTKPVDAEALRAEVH
Specific function: Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomet
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AcsF family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008434 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR003251 [H]
Pfam domain/function: PF02915 Rubrerythrin [H]
EC number: =1.14.13.81 [H]
Molecular weight: Translated: 42669; Mature: 42669
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLTDQPSPELLRPGVKKPVQETLLTPRFYTTDFDKIANMVLSSHEEEILAALEELRAD CEECCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH YNRNHFIRDESFEQSWDHFDEKTRSIFIDFLERSCTSEFSGFLLFKELSRRLRDRSPILA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EAFHLLARDEARHAGFINKSMVDFGLCLDLKYLTQKRTYTFFPPEWVIYTVYLSEKIGYW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCHH RYILVYRHLEKHPEHNIYPLFKYFESWCQDENRHGDFFKALLRSQKSLWKTWQSRLWSRF HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLLTVFVTHSLTTLERSDFYEMIGLDAHQYNRDVIRNTNETSLRAFPEVLDTNHPQFFTR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHHCCCCHHHHHH LEACAAANEHLKAIATNGNPKVIQFFQKIPWIINIVWHMALIFFTKPVDAEALRAEVH HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC >Mature Secondary Structure MVTLTDQPSPELLRPGVKKPVQETLLTPRFYTTDFDKIANMVLSSHEEEILAALEELRAD CEECCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHH YNRNHFIRDESFEQSWDHFDEKTRSIFIDFLERSCTSEFSGFLLFKELSRRLRDRSPILA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH EAFHLLARDEARHAGFINKSMVDFGLCLDLKYLTQKRTYTFFPPEWVIYTVYLSEKIGYW HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCHH RYILVYRHLEKHPEHNIYPLFKYFESWCQDENRHGDFFKALLRSQKSLWKTWQSRLWSRF HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH FLLTVFVTHSLTTLERSDFYEMIGLDAHQYNRDVIRNTNETSLRAFPEVLDTNHPQFFTR HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCHHHHCCCCCHHHHHHHHHHCCCCHHHHHH LEACAAANEHLKAIATNGNPKVIQFFQKIPWIINIVWHMALIFFTKPVDAEALRAEVH HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]