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The map label for this gene is yjeA [H]

Identifier: 170078598

GI number: 170078598

Start: 2075293

End: 2076027

Strand: Reverse

Name: yjeA [H]

Synonym: SYNPCC7002_A1994

Alternate gene names: 170078598

Gene position: 2076027-2075293 (Counterclockwise)

Preceding gene: 170078599

Following gene: 170078596

Centisome position: 69.02

GC content: 51.84

Gene sequence:

>735_bases
GTGAAAGCTGTTCGTTTTGTTCCCCTGCGCCCCAAGGCTTGGCAGAAGGTCATTCGTTTATTTTTCGCCACGGCGATCGC
CTTGATCTTAGTGCGAAATGCGTTGCCTTTGATCAGACAGATTAGCTTTTTTGGCCTGTACCAAGTCGCCACCCCAGAGA
AAGTTGTTGCTTTGACCTATGATGACGGCCCGGCACCGCCCTATACCGAAGCCATTTTAGAGATTCTCGACGACTACCAA
GCGAAGGCCACCTTTTATGTGGTGGGGCAAAATATCGAACTCTATCCAGACACCGTCCGCCAAACCATCGCCGCTGGCCA
TGAACTGAGCAACCATTCCTACGAGCACAAATACATGGCCTTCCGTTCCTGGGACTACATCACCAACGAAGTGGACAAAA
CGGATCAACTGCTGCGAAATTTGGGGGTCACGGGCCAGATCGATTTTCGGCCGCCCTGGGGTCGTCGTTTTCTCCTGCTT
CCCCTTTATCTCCATCAGCAACAGAAACGCCTCGTGATTTGGGATGTGGATTCTTTTGATTGGGAAATTGAGGCTAGTCC
TGTGGACATTGCGGCACGGGTCATTGGGGCTGTACAACCCGGATCGATTGTTTTGATGCACGATGGCGGCGGCGATCGCC
AACGCACCGTAGAAGCGACAGATTTGATTTTGAGTCAGTTGACCGAAGCCGGCTATCGCTTTGTGACCGTGGCTGAACTC
TTTGAATTGTCCTAA

Upstream 100 bases:

>100_bases
TAAAATTAGCGGCAACGCCCGGGATCTACTCACCGATGAACGGGTTAAAGCAGCCTATCTTGGCTAGGTAGGTGCTCACT
TCTTCCCTGCGGTACCCATT

Downstream 100 bases:

>100_bases
AAAATTAAGCCGATTGCACCGAATCTATTTCCCCCTGCAAAGGACAAACGCAAGTCTCCTGTTCCAACCATTGGGAGCCG
ACTTGATGGAGGGCGGTCAT

Product: polysaccharide deacetylase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKAVRFVPLRPKAWQKVIRLFFATAIALILVRNALPLIRQISFFGLYQVATPEKVVALTYDDGPAPPYTEAILEILDDYQ
AKATFYVVGQNIELYPDTVRQTIAAGHELSNHSYEHKYMAFRSWDYITNEVDKTDQLLRNLGVTGQIDFRPPWGRRFLLL
PLYLHQQQKRLVIWDVDSFDWEIEASPVDIAARVIGAVQPGSIVLMHDGGGDRQRTVEATDLILSQLTEAGYRFVTVAEL
FELS

Sequences:

>Translated_244_residues
MKAVRFVPLRPKAWQKVIRLFFATAIALILVRNALPLIRQISFFGLYQVATPEKVVALTYDDGPAPPYTEAILEILDDYQ
AKATFYVVGQNIELYPDTVRQTIAAGHELSNHSYEHKYMAFRSWDYITNEVDKTDQLLRNLGVTGQIDFRPPWGRRFLLL
PLYLHQQQKRLVIWDVDSFDWEIEASPVDIAARVIGAVQPGSIVLMHDGGGDRQRTVEATDLILSQLTEAGYRFVTVAEL
FELS
>Mature_244_residues
MKAVRFVPLRPKAWQKVIRLFFATAIALILVRNALPLIRQISFFGLYQVATPEKVVALTYDDGPAPPYTEAILEILDDYQ
AKATFYVVGQNIELYPDTVRQTIAAGHELSNHSYEHKYMAFRSWDYITNEVDKTDQLLRNLGVTGQIDFRPPWGRRFLLL
PLYLHQQQKRLVIWDVDSFDWEIEASPVDIAARVIGAVQPGSIVLMHDGGGDRQRTVEATDLILSQLTEAGYRFVTVAEL
FELS

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323338, Length=191, Percent_Identity=27.7486910994764, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021729
- InterPro:   IPR011330
- InterPro:   IPR017219
- InterPro:   IPR002509 [H]

Pfam domain/function: PF11738 DUF3298; PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 27826; Mature: 27826

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKAVRFVPLRPKAWQKVIRLFFATAIALILVRNALPLIRQISFFGLYQVATPEKVVALTY
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEE
DDGPAPPYTEAILEILDDYQAKATFYVVGQNIELYPDTVRQTIAAGHELSNHSYEHKYMA
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECHHHHHHHHHHCCCCCCCCCCHHEEE
FRSWDYITNEVDKTDQLLRNLGVTGQIDFRPPWGRRFLLLPLYLHQQQKRLVIWDVDSFD
EECHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCCCC
WEIEASPVDIAARVIGAVQPGSIVLMHDGGGDRQRTVEATDLILSQLTEAGYRFVTVAEL
EEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHH
FELS
HHCC
>Mature Secondary Structure
MKAVRFVPLRPKAWQKVIRLFFATAIALILVRNALPLIRQISFFGLYQVATPEKVVALTY
CCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEEEE
DDGPAPPYTEAILEILDDYQAKATFYVVGQNIELYPDTVRQTIAAGHELSNHSYEHKYMA
CCCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEECHHHHHHHHHHCCCCCCCCCCHHEEE
FRSWDYITNEVDKTDQLLRNLGVTGQIDFRPPWGRRFLLLPLYLHQQQKRLVIWDVDSFD
EECHHHHHHHCCHHHHHHHHCCCCEEEECCCCCCCEEEEEEHHHCCCCCEEEEEECCCCC
WEIEASPVDIAARVIGAVQPGSIVLMHDGGGDRQRTVEATDLILSQLTEAGYRFVTVAEL
EEEECCHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEHHHH
FELS
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]