| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is ho2 [H]
Identifier: 170078595
GI number: 170078595
Start: 2072846
End: 2073598
Strand: Reverse
Name: ho2 [H]
Synonym: SYNPCC7002_A1991
Alternate gene names: 170078595
Gene position: 2073598-2072846 (Counterclockwise)
Preceding gene: 170078596
Following gene: 170078594
Centisome position: 68.94
GC content: 51.39
Gene sequence:
>753_bases ATGACGACCCTATCCCAACGCCTCCGCTTTGGTACCCAAACCTCCCATACCCTCTCAGAAAATACAGCTTTTATGAAGTG CTTTTTGAAGGGCATTGTGGAGCGGCAACCCCTCCGGAAATTGATGGCCAATTTGTATGCGGTCTATTACACCCTGGAGA CGGCTTTTGAACAGTACAAAGACCACGAAATTCTAGGGGAAATCTATTTCCCGGAGTTGAACCGAGTGCCCCATTTGGAA GAGGATCTTGCCTTTTACTACGGTGAGCATTGGCACAGGCAACTGGAACTACTCCCGGCGGGTAAAGTCTACCAAGCGCG CTTACAAGAACTGGCCGCCACTGATCCACTGCTCCTGATTGCCCATGCCTATGTGCGCTATATGGGAGATCTATCCGGCG GTCAGAGTTTAAAAAATATTATCCGCTCAGCCTTAGCGTTACCCGATGGCCAGGGCACCAGATTTTATGAATTTGACTCC TGGCCGACCCCAGGCGATCGCCGCAATTTTAAGCTGCAATATCGGGATGCGCTGGATCGCTTGAATCTAGACGAAGAAAC GATCCAGAAGATGATCAACGAAGCGAATTATGCCTTTGCCCTCAACCGGGATGTGATGCACGAGTTGGAGCCGGACGTAA AGGCGGCCATCGGTGAACATACCTTTGATTTGTTAACTCGCCAAGACCGCCCGGGCAGTACCGAAAATCAGCGCCGCTAT CCCGAAGACCAGGCGATCGTGGCGTCTTCTTAG
Upstream 100 bases:
>100_bases ATTTTCTTCACCAAGCCTGTGGATGCCGAAGCCCTACGGGCCGAGGTTCACTAAAAATTCCCCTCAGTATTTTTCCGCTT ATTTACCCCATGGAGTAGCC
Downstream 100 bases:
>100_bases AACCTGTTTTAATCCTCTATTCCTACAAGTTCCCCTGAGCACTTTTGTGATGTGGTTTGAAAGCTTAACGTCGCCCTGAA GTGGAGGTGCCGGGGGATTT
Product: Heme oxygenase 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MTTLSQRLRFGTQTSHTLSENTAFMKCFLKGIVERQPLRKLMANLYAVYYTLETAFEQYKDHEILGEIYFPELNRVPHLE EDLAFYYGEHWHRQLELLPAGKVYQARLQELAATDPLLLIAHAYVRYMGDLSGGQSLKNIIRSALALPDGQGTRFYEFDS WPTPGDRRNFKLQYRDALDRLNLDEETIQKMINEANYAFALNRDVMHELEPDVKAAIGEHTFDLLTRQDRPGSTENQRRY PEDQAIVASS
Sequences:
>Translated_250_residues MTTLSQRLRFGTQTSHTLSENTAFMKCFLKGIVERQPLRKLMANLYAVYYTLETAFEQYKDHEILGEIYFPELNRVPHLE EDLAFYYGEHWHRQLELLPAGKVYQARLQELAATDPLLLIAHAYVRYMGDLSGGQSLKNIIRSALALPDGQGTRFYEFDS WPTPGDRRNFKLQYRDALDRLNLDEETIQKMINEANYAFALNRDVMHELEPDVKAAIGEHTFDLLTRQDRPGSTENQRRY PEDQAIVASS >Mature_249_residues TTLSQRLRFGTQTSHTLSENTAFMKCFLKGIVERQPLRKLMANLYAVYYTLETAFEQYKDHEILGEIYFPELNRVPHLEE DLAFYYGEHWHRQLELLPAGKVYQARLQELAATDPLLLIAHAYVRYMGDLSGGQSLKNIIRSALALPDGQGTRFYEFDSW PTPGDRRNFKLQYRDALDRLNLDEETIQKMINEANYAFALNRDVMHELEPDVKAAIGEHTFDLLTRQDRPGSTENQRRYP EDQAIVASS
Specific function: Catalyzes the opening of the heme ring with the release of iron. Key enzyme in the synthesis of the chromophoric part of the photosynthetic antennae [H]
COG id: COG5398
COG function: function code P; Heme oxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heme oxygenase family [H]
Homologues:
Organism=Homo sapiens, GI4504437, Length=209, Percent_Identity=42.5837320574163, Blast_Score=161, Evalue=6e-40, Organism=Homo sapiens, GI187761311, Length=212, Percent_Identity=39.622641509434, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI187761309, Length=212, Percent_Identity=39.622641509434, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI187761307, Length=212, Percent_Identity=39.622641509434, Blast_Score=159, Evalue=3e-39, Organism=Homo sapiens, GI8051608, Length=212, Percent_Identity=39.622641509434, Blast_Score=159, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002051 - InterPro: IPR016053 - InterPro: IPR016084 - InterPro: IPR018207 [H]
Pfam domain/function: PF01126 Heme_oxygenase [H]
EC number: =1.14.99.3 [H]
Molecular weight: Translated: 29011; Mature: 28880
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00593 HEME_OXYGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLSQRLRFGTQTSHTLSENTAFMKCFLKGIVERQPLRKLMANLYAVYYTLETAFEQYK CCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHEILGEIYFPELNRVPHLEEDLAFYYGEHWHRQLELLPAGKVYQARLQELAATDPLLLI CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH AHAYVRYMGDLSGGQSLKNIIRSALALPDGQGTRFYEFDSWPTPGDRRNFKLQYRDALDR HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHH LNLDEETIQKMINEANYAFALNRDVMHELEPDVKAAIGEHTFDLLTRQDRPGSTENQRRY CCCCHHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCC PEDQAIVASS CCCCEEECCC >Mature Secondary Structure TTLSQRLRFGTQTSHTLSENTAFMKCFLKGIVERQPLRKLMANLYAVYYTLETAFEQYK CCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHEILGEIYFPELNRVPHLEEDLAFYYGEHWHRQLELLPAGKVYQARLQELAATDPLLLI CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHH AHAYVRYMGDLSGGQSLKNIIRSALALPDGQGTRFYEFDSWPTPGDRRNFKLQYRDALDR HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEEEHHHHHHHH LNLDEETIQKMINEANYAFALNRDVMHELEPDVKAAIGEHTFDLLTRQDRPGSTENQRRY CCCCHHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCC PEDQAIVASS CCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]