Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078555

Identifier: 170078555

GI number: 170078555

Start: 2029981

End: 2030547

Strand: Direct

Name: 170078555

Synonym: SYNPCC7002_A1950

Alternate gene names: NA

Gene position: 2029981-2030547 (Clockwise)

Preceding gene: 170078554

Following gene: 170078556

Centisome position: 67.49

GC content: 51.5

Gene sequence:

>567_bases
TTGCGTTCAAAATTGAAACCAAGTGAGCGTAAATTTCCCAATCATCCCATGCGTTTTCAATTTATCTATCGGGCGATCGC
CCCTGTGCTTCTGGCGAGTCTATTGTTCCTGACGGCCTGTGGTGGCAATGCCCCGGTTCCCCCCCCTGACCCAAACCCTG
GGGCTAATACTGAAGTCACCACCCCGGCAACGGAGACGGCCCAAACACCTCAAAAGGGCAGTGCTTTTAATCAATTTTTC
CCAGCGGACAAAACCGAGGGCTATGACCGGGTCTTTACCCAAGAAAAAGAAGGTTTCGCGGAAATTAAATTAACCCTCAA
CGGTACGGAAATGGCAAAAATTTCCATCTCAGATACCGCCACCAATCTCGCTGCCCGCAGTAAATTTGCTGAAGCCGAAG
AAACGGTTGATGGGTTCCCCCTCGTGGCCCAGGGAGCAAATGCCCATGCGGTTTTAGTGGGCGATCGCTATCAAGTGAAA
GTGATGTCCCGGGATCCTAGTTTTGGCCCCGATGAGCGCAAGGCTTGGCTCGCCAAGGTGAATCTACAGGGTTTAGCGAG
TTTATAG

Upstream 100 bases:

>100_bases
GTTTGCGCTCAAACTCATGACCGGACAAAAGGGCCGTCAACCCCGCATTTTGGCGTAACTTTCTTGCTAGATTATTAATT
TTTCGGGAGATTCTGGGAAT

Downstream 100 bases:

>100_bases
GCCAATTTTTTGTAAACCACAGCCGTAATTTTCTATTGACTAAATTAGGAGGTTTTTCATGAGTGCTTCGATTGTGGAGT
TGATGGATCAGTTACCCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF
PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK
VMSRDPSFGPDERKAWLAKVNLQGLASL

Sequences:

>Translated_188_residues
MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF
PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK
VMSRDPSFGPDERKAWLAKVNLQGLASL
>Mature_188_residues
MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVTTPATETAQTPQKGSAFNQFF
PADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTATNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVK
VMSRDPSFGPDERKAWLAKVNLQGLASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20412; Mature: 20412

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVT
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TPATETAQTPQKGSAFNQFFPADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTA
CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEEECCHH
TNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVKVMSRDPSFGPDERKAWLAKV
HHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCHHEEEEEE
NLQGLASL
CCHHHCCC
>Mature Secondary Structure
MRSKLKPSERKFPNHPMRFQFIYRAIAPVLLASLLFLTACGGNAPVPPPDPNPGANTEVT
CCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
TPATETAQTPQKGSAFNQFFPADKTEGYDRVFTQEKEGFAEIKLTLNGTEMAKISISDTA
CCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCEEEEEEECCHH
TNLAARSKFAEAEETVDGFPLVAQGANAHAVLVGDRYQVKVMSRDPSFGPDERKAWLAKV
HHHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCEEEEEEECCCCCCCCCHHEEEEEE
NLQGLASL
CCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA