| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078551
Identifier: 170078551
GI number: 170078551
Start: 2026811
End: 2027407
Strand: Direct
Name: 170078551
Synonym: SYNPCC7002_A1946
Alternate gene names: NA
Gene position: 2026811-2027407 (Clockwise)
Preceding gene: 170078550
Following gene: 170078552
Centisome position: 67.38
GC content: 51.26
Gene sequence:
>597_bases ATGACCGACGAACAGCTCAAGCTTTTTTCTGTGGCCGATGCCCCCAATCCTTACCGCGTCGAACGCGCCCCCAGGCTTAC CATGGGCCAAGAAAGCCTCCTGCAATGGAAGCAACGACTGCAAAACTTTCAGGACAAGGTTCGTCAAAATCCAGCCGCAA GCCAAACCAGTTTACTTTTTGAGACCCAGTCGAAGCCAGACCACTGGGACGCCGAAAAAATTGACCCCTTTACCCTGCCG CCGAAGCCCTGGGATTTCTATCGGGAGCGTTATGATCCCCTCCAGGAAGGTCAAGCGAATATTTACTTTGTCCTCGACCA TGCGGTGCCGTTGCTGCTCTATGTGGGGGAAACAAAATTATCGATTAAGCAACGCTGGAAAGGGGTTCATGATTGCAAGG ACTATATTGATGCTTACATCAGCTTGCACCGTCAGTATGGCTTGAATGTGGCTGTTAATTTAGCGTTTAATGTGTCAGTC CCCACAGACCGTTCCCAACGGCTCGCTCTAGAACGGGATTTAATCTTGAAGTGGCGATCGCCGTTTAATAAAGAATGTTG GCGCTACTGGGGACAGCCCTTCCAGCGGCGGGGCTAA
Upstream 100 bases:
>100_bases GATGCCGATGGGCTACCCCTCGAATTTATCCGGTATCAGGGAGCACGGGCCTAGGATTTGCCTTTGCTACACTGGAGAGC CTGTGAATTTTTTCTCGCCC
Downstream 100 bases:
>100_bases GATGGGGCTATGCTCCCCGTAAATTTTTCTACCCATTGCCTATAATTGGCGATGTTTCGCTTCCTCTTTTTCCCTTGGCA TGGCTATTTCTCCTAGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLP PKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSV PTDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG
Sequences:
>Translated_198_residues MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLP PKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSV PTDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG >Mature_197_residues TDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLFETQSKPDHWDAEKIDPFTLPP KPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKLSIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVP TDRSQRLALERDLILKWRSPFNKECWRYWGQPFQRRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23484; Mature: 23353
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLF CCCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE ETQSKPDHWDAEKIDPFTLPPKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKL ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEECCCHH SIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVPTDRSQRLALERDLILKWRS HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC PFNKECWRYWGQPFQRRG CCCHHHHHHCCCHHHCCC >Mature Secondary Structure TDEQLKLFSVADAPNPYRVERAPRLTMGQESLLQWKQRLQNFQDKVRQNPAASQTSLLF CCCCEEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHEEEE ETQSKPDHWDAEKIDPFTLPPKPWDFYRERYDPLQEGQANIYFVLDHAVPLLLYVGETKL ECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHCCCCEEEEEECCCCEEEEEECCCHH SIKQRWKGVHDCKDYIDAYISLHRQYGLNVAVNLAFNVSVPTDRSQRLALERDLILKWRS HHHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCCC PFNKECWRYWGQPFQRRG CCCHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA