| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078492
Identifier: 170078492
GI number: 170078492
Start: 1971691
End: 1972314
Strand: Reverse
Name: 170078492
Synonym: SYNPCC7002_A1886
Alternate gene names: NA
Gene position: 1972314-1971691 (Counterclockwise)
Preceding gene: 170078494
Following gene: 170078487
Centisome position: 65.57
GC content: 47.92
Gene sequence:
>624_bases ATGGCGAAGAAATTTGGCTGGTCTCCGGCGATACCCTACCCGTTGGCCTGGTTGCGTTTATTGATTAATTTAATTGTTTT TGGTACGACTGCAGGCTTGATTAAGGAGGCTTCTGAAAATTATGTTTTAACGGTTCATCCCTTGTTTTTGCTGTTTGTGC TGGTGTTTATGGGTGGACTGGCCTTTGGGCTGCATTATCTATCCCAATGGATATTGGTGAGATTGGCAGGCATTCGAGAG ATGGGGATGATTGATAGTCTCTGGGAAGCGGTGCTATTGGTGATGGTGACGGTAAACAGCCTTCTCTTGGTGTTGTTGCT CTATGCGGGGACTTATATCGGCGCTCCCTTTGTCGAGCCGGAAAGCTTAGATGTGGTCTCTGCTGAGACGATCTGGATCG CCATTATGTATTCGGCGATCGCCTTATATCTGTACCACCTGGAATATTTGGTCAGACACCCGGAAGTTTTGAGACGATAT TTCACGCCACCAGAGGAACGGATCAACCTGGAGAAAAAACCACCCAAGACTGAGCTAACGCCCCAGACACGACAGCGCGA AATCGATTGGGAGCTAGAGCGACTCAAGGCCCAGATCGACAATGAAAAAAGGTTCGGGAAATAA
Upstream 100 bases:
>100_bases GGGTAGGGAAACGCCCTCTTTTAATGGTCTTTTTAGGGGGCGTTTTACGATGGGAATAATTTTCTTCTGGGTAAGATTAT GGCAATGAGGAAGAAAAATT
Downstream 100 bases:
>100_bases TCCTGAACCTTTGTGATTGGAGAGAAACAAACTTTTTATTTGATGACGGCGGTGACGATCGTCGTGATCGTGGCAGTCGC CAACAGGCCAAAGGCTAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIRE MGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRY FTPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK
Sequences:
>Translated_207_residues MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIRE MGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRY FTPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK >Mature_206_residues AKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGLAFGLHYLSQWILVRLAGIREM GMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEPESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYF TPPEERINLEKKPPKTELTPQTRQREIDWELERLKAQIDNEKRFGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23849; Mature: 23717
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: PS00962 RIBOSOMAL_S2_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGL CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH AFGLHYLSQWILVRLAGIREMGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYFTPPEERINLEKKPPKTELT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCC PQTRQREIDWELERLKAQIDNEKRFGK CHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure AKKFGWSPAIPYPLAWLRLLINLIVFGTTAGLIKEASENYVLTVHPLFLLFVLVFMGGL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHH AFGLHYLSQWILVRLAGIREMGMIDSLWEAVLLVMVTVNSLLLVLLLYAGTYIGAPFVEP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC ESLDVVSAETIWIAIMYSAIALYLYHLEYLVRHPEVLRRYFTPPEERINLEKKPPKTELT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCHHHCCCCCCCCCCCCC PQTRQREIDWELERLKAQIDNEKRFGK CHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA