Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078468

Identifier: 170078468

GI number: 170078468

Start: 1951742

End: 1953544

Strand: Direct

Name: 170078468

Synonym: SYNPCC7002_A1862

Alternate gene names: NA

Gene position: 1951742-1953544 (Clockwise)

Preceding gene: 170078467

Following gene: 170078469

Centisome position: 64.88

GC content: 51.03

Gene sequence:

>1803_bases
ATGGTTCACACGGCAACTTCCATGGCAACGCCAGCCCCAAGCGCGCAAAATACGGTGGCGATCGCCTATCAAGTGGCAAT
GCCCCAGCCCCAAACCCACCTGTTTGAGGTAACCATTCACATTAGCCAATGGGAAGCCGCAGTGCTGGATCTAAAAATGC
CCGTATGGACGCCTGGCTCTTATATGGTGCGCGAATATTCCCGCCATCTCCAGGATTTTCGGGCGACTACAGCGGCAGGT
GTTGACCTCAGTTGGCGCAAAGTGACGAAAAACCACTGGCAAGTTGAAACCGCTGACACCTCAGACATCCAAGTCCACTA
TCGGGTCTTTGCCAATGACCTCACCGTCCGCACCAATCACCTTGATAGTACCCACGGTTATTTCAACGGTGCGGCTTTAT
TTTGCTTTATTCCGGGCTACCAAGACCAAGCTTGTACCTTGACCGTCGAACCGCCCCACATCGCCTGGGAAGTAAATACC
ACCTTGCCCCTGATCGAAGACCAGGAAAATTGTTTCTGGGTCGAAAATTTTGATGTGTTGGTGGATAGTCCTGTGGAGGT
GGGTCTCCACGAAAATTATGAGTTCCTCTGTGAAGGGAAGCCCCACCGTTGGGTCGTTTGGGGGGAAGGCAATTTTGAAG
CGGAAAAGGCGATCGCCGATACCAAAAAAATCATCCAGACCGAAGCCAAAATTTTCGGCGGTGAGTTGCCCTACGACGAA
TATATGTTTTTGTTGCACCTGTCCGGCAGTGGCTATGGGGGCCTCGAACATAAAGAAAGTTGCTCTTTAAATTATCCCCG
GTTTGGCTTCCAAAAATCCGACCAATACAACCGCTTTATGCAGTTGGTGGCCCACGAATTTTTCCACCTCTGGAATGTGA
AGCGCATTCGCCCCAAGGAACTCGAAACCTTTGACTACGAGACAGAAAATTACACCCCTTCCCTTTGGTTTGCCGAGGGT
GTGACCAGTTACTATGATCTGCTCATTCCGTTGTGGGCTGGCATCTATGACAAGACCTTTTTCCTTGAAAGCCTCAGCAA
GGACATCACCCGCTATCTCCTTACCCCTGGGCGTTTGGTGCAGCCCCTGGCCGAATCGAGTTTTGATGCCTGGATTAAGC
TCTACCGCCGCGAGGCCCATAGCAACAATAACCAGATGTCCTACTATCTCAAGGGTGCTCTCGTGGCGATGCTACTGGAT
CTCAAAATCCGCGATCGCCACCAAAACCAAAAATCCCTAGATGATGTGTTGCGGATCATGTGGGAAAAATTTGGCAAACC
AGAAATTGGCTTTACCCCGGCCCAAGTGGAGCAGGTAATTAGTGAGGTGGCGGGCTTTGACCTGAGTGACTTTTTCCACG
AATTTCTCCATACCACGGCAGAACTTCCCCTCGGCGCAGCCCTTGAAACCTTCGGTCTACAAATTAAACCCGTCTACACC
AACAAAGATCTCCCCTACCTGGGTCTCACCGTCACCGACCAAAACAATCGCACCCTGGTGCAAACGGTCAATGTTGATTC
CCCGGCCCATCAAGCGGGCATTGATCCAGAAGATGAACTCCTGGCGATCACCAACTATCGCACCAATGCCGAACAACTCA
ACCATCGCCTTCAGAACTACCAAGCAGGTGATACAATTTCGATCACGATTTTTCACCAAGACCAACTGAAAACCCTTGCC
GTCACCCTCGCTGCCCCCCAACCGAGCAGTTATCAAGTCGTGAAAAATCCCCAAGCCTCTGCCAAGCAGTTGCAAAACCT
CAAGGGCTGGCTGAATCCCAAAGATTCAGGTGCGGTAAGATAA

Upstream 100 bases:

>100_bases
GGGAAAGGGTGGATCGAAATGGGTGAAGGTCGCATTCATTTGATCAACTTTAAACAACTGACAAATTTAGCCAACCGAGC
ATAGGAGTAAATTTTTTCTG

Downstream 100 bases:

>100_bases
ATTTCTTGCTTCATTGTTCTTTCTGTAATTCATTTCGCACCCTACCGTTTGCCCCCAACCCATGCATAATTTCCTTCCCA
CTGCCTATTTCCAAGGAAAA

Product: M61 glycyl aminopeptidase protein

Products: NA

Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; PDZ Domain Family Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Glycyl Aminopeptidase Protein; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein

Number of amino acids: Translated: 600; Mature: 600

Protein sequence:

>600_residues
MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG
VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT
TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE
YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG
VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD
LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT
NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA
VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR

Sequences:

>Translated_600_residues
MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG
VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT
TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE
YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG
VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD
LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT
NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA
VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR
>Mature_600_residues
MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGSYMVREYSRHLQDFRATTAAG
VDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNHLDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNT
TLPLIEDQENCFWVENFDVLVDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE
YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKELETFDYETENYTPSLWFAEG
VTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLVQPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLD
LKIRDRHQNQKSLDDVLRIMWEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT
NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNYQAGDTISITIFHQDQLKTLA
VTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68533; Mature: 68533

Theoretical pI: Translated: 5.33; Mature: 5.33

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGS
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCH
YMVREYSRHLQDFRATTAAGVDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEECCEEEEECC
LDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNTTLPLIEDQENCFWVENFDVL
CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEEECCEEE
VDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE
ECCCEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKE
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
LETFDYETENYTPSLWFAEGVTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLV
CCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLDLKIRDRHQNQKSLDDVLRIM
HHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
WEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT
HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEE
NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNY
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
QAGDTISITIFHQDQLKTLAVTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR
CCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVHTATSMATPAPSAQNTVAIAYQVAMPQPQTHLFEVTIHISQWEAAVLDLKMPVWTPGS
CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEECCCEEEEEEECCCCCCCH
YMVREYSRHLQDFRATTAAGVDLSWRKVTKNHWQVETADTSDIQVHYRVFANDLTVRTNH
HHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCEEEEECCCCCEEEEEEEEECCEEEEECC
LDSTHGYFNGAALFCFIPGYQDQACTLTVEPPHIAWEVNTTLPLIEDQENCFWVENFDVL
CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCEEEEEECCCCCEEECCCCEEEEECCEEE
VDSPVEVGLHENYEFLCEGKPHRWVVWGEGNFEAEKAIADTKKIIQTEAKIFGGELPYDE
ECCCEEECCCCCEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
YMFLLHLSGSGYGGLEHKESCSLNYPRFGFQKSDQYNRFMQLVAHEFFHLWNVKRIRPKE
EEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
LETFDYETENYTPSLWFAEGVTSYYDLLIPLWAGIYDKTFFLESLSKDITRYLLTPGRLV
CCEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
QPLAESSFDAWIKLYRREAHSNNNQMSYYLKGALVAMLLDLKIRDRHQNQKSLDDVLRIM
HHHHHCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
WEKFGKPEIGFTPAQVEQVISEVAGFDLSDFFHEFLHTTAELPLGAALETFGLQIKPVYT
HHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHCCEEEEEEE
NKDLPYLGLTVTDQNNRTLVQTVNVDSPAHQAGIDPEDELLAITNYRTNAEQLNHRLQNY
CCCCCEEEEEEECCCCCEEEEEECCCCCHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCC
QAGDTISITIFHQDQLKTLAVTLAAPQPSSYQVVKNPQASAKQLQNLKGWLNPKDSGAVR
CCCCEEEEEEEECCCCEEEEEEEECCCCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA