| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is thiO/thiG [H]
Identifier: 170078432
GI number: 170078432
Start: 1911285
End: 1913267
Strand: Direct
Name: thiO/thiG [H]
Synonym: SYNPCC7002_A1826
Alternate gene names: 170078432
Gene position: 1911285-1913267 (Clockwise)
Preceding gene: 170078431
Following gene: 170078433
Centisome position: 63.54
GC content: 54.01
Gene sequence:
>1983_bases ATGGAAAAAATGGCACAGCAAGCGGACGTTTTAATTTTAGGAGGCGGGATCATTGGTTTGGCGATCGCCGTCGAATTGCA ACAACAGGGTTGTGCCGTGACAATCCTGAATCGAAACTTTACCGAGGCTGCCTGCCATGCCGCTGCCGGAATGCTCGCCC CGGAGGCCGAAGGGTTAACAGGAACGATGCTCGAATTGGGGCGGCGATCGCGCAATATGTACGCCGACTGGTGCCGCAAA ATTGAACAACTCAGCGGCGTCGATGTGGGTTATTTGCCCTGTGGTATTTTTGCTCCCAAATCCGTTGCACCGAGCCAAAC CGTGACTGATAGCGCTTCTGTTTGGCTAGACCGCGCCCAACTGACCTACCATGAACCGGGTTTTGGTGATGGGGTGGTGG GAGCCTGGTGGCACCCCGAAGATGGCCAAGTAGACAACCGCCGTCTGAGCCAAGCCTTACTCCAAGCGGCACGGGGTCTG GGAGTGGTAATTAAAGAAGGCGTTACTGTTTTGGGTCTCCAACAAATCCAAGGACAGGTGCAAGCGGTGCAGACCGATCA AGGGCTATTCCAAGCGGGCCATTATGTTTTGGCCGCAGGTTCCTGGTCGAGTCAGATCACGCCCCTGTCCGTTTATCCGA TTAAAGGGGAAATGATGTCCCTGAGGATGCCGAATCCTGAGGCCCTCCGGCGGGTGATTTTTGGTGATAATCTGTACCTC GTGCCGCGCACCAATGGGACCCTAATCATTGGGGCTACCGCAGAAACTGTGAAGTGGCAACCCAACAATACCCCCCAAGG GATCCAAACCCTGCTGAATAAAGCGATTCAACTGTTGCCGAAACTCAAAGATTGGGAAATCACGGAACTCTGGTGGGGTT TTCGGCCCGCAACCCCCGATGAAAAGCCGATTCTGGGGGCATCCCCTTGTGAAAATCTCACCTACGCCACGGGCCATTAT CGCAATGGCATTTTATTGGCTCCCATCACGGCGAAACTCATTGGCGATCGCCTAATCCGCAACCAAGCAGATCCCCTCCT CCAACATTTTTCTTACCAACGCTTTTTAAATAACCCAACCCATCAACCCATGCAAAACGGTCACAACAGTCAGAATGCTC AAAACGGTTCAATGCCGAGCTTTTTTATCAGCCCCAAAACCACAACTGCAACGCCAAACCCCACGGAAACCCCTGATCAA CTGGTCATTGCCGGTCGTCGCTTTACTTCCCGGTTAATGACAGGAACGGGGAAATATCCCTCAATTGCCGCAATGCAAGC AAGCGTTGAAGCCAGCGGTTGCGAAATTGTCACGGTGGCAGTGCGTCGCGTCCAAACCAAAGCCCCAGGCCACGAAGGAC TTGCCGAAGCCCTCGACTGGCAAAAAATTTGGATGTTGCCTAATACGGCGGGCTGTAAAACTGCCGAGGAAGCGATCCGG GTAGCTCGTTTAGGTCGGGAAATGGCCCGTCTGTTAGGCCAAGAAGATAACAACTTTGTCAAATTAGAAGTGATCCCCGA TGCCCGCTACCTACTGCCGGATCCCATCGGTACCCTCGACGCCGCAGAACAATTGGTCAAAGAAGGGTTTGCGGTGCTGC CCTATATTAATGCCGATCCTCTGTTGGCGAAACGCTTAGAGGAAGTGGGCTGTGCCACGGTGATGCCCCTCGGTTCTCCC ATTGGGTCGGGCCAGGGGATTCAAAATGAAGCCAACATCAAAATTATTATTGAACAGAGCAAGGTTCCCGTGGTGATTGA TGCGGGGATTGGCTCCCCTAGTGAAGCGGCCTACGGGATGGAATTGGGAGCCGATGCGCTACTGGTCAATTCGGCGATCG CCCTCGCTAAAGATCCCGTACAAATGGGTCGAGCCATGGGGTTAGCCACCACTGCCGGCCGCCTCGCTCACCTAGCCGGG CGCATTCCGGTTCAACATATTGCCAGTGCCAGTTCTCCCCAAACTGGACTGGTCAGCACCTAA
Upstream 100 bases:
>100_bases CTGCTACTTGGAGTGGGGATTTTTTATTTACAAGTCAAGGTTGCCGCAAAAATCTTGGCCGTTGTAGCTTAAAGGAAGGC ACCGGAAGGAATTTAAGGTG
Downstream 100 bases:
>100_bases GTTCCTCCTGTCGATTGAATGCGGCGATCGCATCATCAATATTCTGATTTCGCAAAAGCAAGCCAGGCCCGTAGTTAACA CTACAAAATCTCCCTGACTG
Product: bifunctional glycine oxidase (ThiO) and thiazole biosynthesis protein ThiG
Products: 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate; 4-hydroxy-benzyl-alcohol; C1 of tyrosine; ThiS protein [C]
Alternate protein names: Probable FAD-dependent glycine oxidase; Thiazole synthase [H]
Number of amino acids: Translated: 660; Mature: 660
Protein sequence:
>660_residues MEKMAQQADVLILGGGIIGLAIAVELQQQGCAVTILNRNFTEAACHAAAGMLAPEAEGLTGTMLELGRRSRNMYADWCRK IEQLSGVDVGYLPCGIFAPKSVAPSQTVTDSASVWLDRAQLTYHEPGFGDGVVGAWWHPEDGQVDNRRLSQALLQAARGL GVVIKEGVTVLGLQQIQGQVQAVQTDQGLFQAGHYVLAAGSWSSQITPLSVYPIKGEMMSLRMPNPEALRRVIFGDNLYL VPRTNGTLIIGATAETVKWQPNNTPQGIQTLLNKAIQLLPKLKDWEITELWWGFRPATPDEKPILGASPCENLTYATGHY RNGILLAPITAKLIGDRLIRNQADPLLQHFSYQRFLNNPTHQPMQNGHNSQNAQNGSMPSFFISPKTTTATPNPTETPDQ LVIAGRRFTSRLMTGTGKYPSIAAMQASVEASGCEIVTVAVRRVQTKAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIR VARLGREMARLLGQEDNNFVKLEVIPDARYLLPDPIGTLDAAEQLVKEGFAVLPYINADPLLAKRLEEVGCATVMPLGSP IGSGQGIQNEANIKIIIEQSKVPVVIDAGIGSPSEAAYGMELGADALLVNSAIALAKDPVQMGRAMGLATTAGRLAHLAG RIPVQHIASASSPQTGLVST
Sequences:
>Translated_660_residues MEKMAQQADVLILGGGIIGLAIAVELQQQGCAVTILNRNFTEAACHAAAGMLAPEAEGLTGTMLELGRRSRNMYADWCRK IEQLSGVDVGYLPCGIFAPKSVAPSQTVTDSASVWLDRAQLTYHEPGFGDGVVGAWWHPEDGQVDNRRLSQALLQAARGL GVVIKEGVTVLGLQQIQGQVQAVQTDQGLFQAGHYVLAAGSWSSQITPLSVYPIKGEMMSLRMPNPEALRRVIFGDNLYL VPRTNGTLIIGATAETVKWQPNNTPQGIQTLLNKAIQLLPKLKDWEITELWWGFRPATPDEKPILGASPCENLTYATGHY RNGILLAPITAKLIGDRLIRNQADPLLQHFSYQRFLNNPTHQPMQNGHNSQNAQNGSMPSFFISPKTTTATPNPTETPDQ LVIAGRRFTSRLMTGTGKYPSIAAMQASVEASGCEIVTVAVRRVQTKAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIR VARLGREMARLLGQEDNNFVKLEVIPDARYLLPDPIGTLDAAEQLVKEGFAVLPYINADPLLAKRLEEVGCATVMPLGSP IGSGQGIQNEANIKIIIEQSKVPVVIDAGIGSPSEAAYGMELGADALLVNSAIALAKDPVQMGRAMGLATTAGRLAHLAG RIPVQHIASASSPQTGLVST >Mature_660_residues MEKMAQQADVLILGGGIIGLAIAVELQQQGCAVTILNRNFTEAACHAAAGMLAPEAEGLTGTMLELGRRSRNMYADWCRK IEQLSGVDVGYLPCGIFAPKSVAPSQTVTDSASVWLDRAQLTYHEPGFGDGVVGAWWHPEDGQVDNRRLSQALLQAARGL GVVIKEGVTVLGLQQIQGQVQAVQTDQGLFQAGHYVLAAGSWSSQITPLSVYPIKGEMMSLRMPNPEALRRVIFGDNLYL VPRTNGTLIIGATAETVKWQPNNTPQGIQTLLNKAIQLLPKLKDWEITELWWGFRPATPDEKPILGASPCENLTYATGHY RNGILLAPITAKLIGDRLIRNQADPLLQHFSYQRFLNNPTHQPMQNGHNSQNAQNGSMPSFFISPKTTTATPNPTETPDQ LVIAGRRFTSRLMTGTGKYPSIAAMQASVEASGCEIVTVAVRRVQTKAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIR VARLGREMARLLGQEDNNFVKLEVIPDARYLLPDPIGTLDAAEQLVKEGFAVLPYINADPLLAKRLEEVGCATVMPLGSP IGSGQGIQNEANIKIIIEQSKVPVVIDAGIGSPSEAAYGMELGADALLVNSAIALAKDPVQMGRAMGLATTAGRLAHLAG RIPVQHIASASSPQTGLVST
Specific function: Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S [H]
COG id: COG2022
COG function: function code H; Uncharacterized enzyme of thiazole biosynthesis
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the thiG family [H]
Homologues:
Organism=Escherichia coli, GI48994993, Length=258, Percent_Identity=54.2635658914729, Blast_Score=256, Evalue=3e-69, Organism=Escherichia coli, GI1787438, Length=263, Percent_Identity=26.615969581749, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006076 - InterPro: IPR012727 - InterPro: IPR008867 [H]
Pfam domain/function: PF01266 DAO; PF05690 ThiG [H]
EC number: NA
Molecular weight: Translated: 70905; Mature: 70905
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKMAQQADVLILGGGIIGLAIAVELQQQGCAVTILNRNFTEAACHAAAGMLAPEAEGLT CCCHHHHCCEEEECCCCEEEHEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCC GTMLELGRRSRNMYADWCRKIEQLSGVDVGYLPCGIFAPKSVAPSQTVTDSASVWLDRAQ HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCE LTYHEPGFGDGVVGAWWHPEDGQVDNRRLSQALLQAARGLGVVIKEGVTVLGLQQIQGQV EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEHHHHHCHH QAVQTDQGLFQAGHYVLAAGSWSSQITPLSVYPIKGEMMSLRMPNPEALRRVIFGDNLYL EEEECCCHHHHCCCEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCCEEE VPRTNGTLIIGATAETVKWQPNNTPQGIQTLLNKAIQLLPKLKDWEITELWWGFRPATPD EECCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCC EKPILGASPCENLTYATGHYRNGILLAPITAKLIGDRLIRNQADPLLQHFSYQRFLNNPT CCCCCCCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC HQPMQNGHNSQNAQNGSMPSFFISPKTTTATPNPTETPDQLVIAGRRFTSRLMTGTGKYP CCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCC SIAAMQASVEASGCEIVTVAVRRVQTKAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIR CHHHHEEECCCCCCEEEEHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHH VARLGREMARLLGQEDNNFVKLEVIPDARYLLPDPIGTLDAAEQLVKEGFAVLPYINADP HHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCH LLAKRLEEVGCATVMPLGSPIGSGQGIQNEANIKIIIEQSKVPVVIDAGIGSPSEAAYGM HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCH ELGADALLVNSAIALAKDPVQMGRAMGLATTAGRLAHLAGRIPVQHIASASSPQTGLVST HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC >Mature Secondary Structure MEKMAQQADVLILGGGIIGLAIAVELQQQGCAVTILNRNFTEAACHAAAGMLAPEAEGLT CCCHHHHCCEEEECCCCEEEHEEEEECCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCC GTMLELGRRSRNMYADWCRKIEQLSGVDVGYLPCGIFAPKSVAPSQTVTDSASVWLDRAQ HHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCE LTYHEPGFGDGVVGAWWHPEDGQVDNRRLSQALLQAARGLGVVIKEGVTVLGLQQIQGQV EEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCEEEHHHHHCHH QAVQTDQGLFQAGHYVLAAGSWSSQITPLSVYPIKGEMMSLRMPNPEALRRVIFGDNLYL EEEECCCHHHHCCCEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCCEEE VPRTNGTLIIGATAETVKWQPNNTPQGIQTLLNKAIQLLPKLKDWEITELWWGFRPATPD EECCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHCCCCCCCCC EKPILGASPCENLTYATGHYRNGILLAPITAKLIGDRLIRNQADPLLQHFSYQRFLNNPT CCCCCCCCCCCCCCEECCCCCCCEEECCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCC HQPMQNGHNSQNAQNGSMPSFFISPKTTTATPNPTETPDQLVIAGRRFTSRLMTGTGKYP CCHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEEECHHHHHHHHHCCCCCC SIAAMQASVEASGCEIVTVAVRRVQTKAPGHEGLAEALDWQKIWMLPNTAGCKTAEEAIR CHHHHEEECCCCCCEEEEHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHH VARLGREMARLLGQEDNNFVKLEVIPDARYLLPDPIGTLDAAEQLVKEGFAVLPYINADP HHHHHHHHHHHHCCCCCCEEEEEECCCCCEECCCCCCHHHHHHHHHHCCCEEEEECCCCH LLAKRLEEVGCATVMPLGSPIGSGQGIQNEANIKIIIEQSKVPVVIDAGIGSPSEAAYGM HHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCCCCCCCCCCH ELGADALLVNSAIALAKDPVQMGRAMGLATTAGRLAHLAGRIPVQHIASASSPQTGLVST HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: deoxyxylulose-5-phosphate; ThiS-COSH; L-tyrosine [C]
Specific reaction: deoxyxylulose-5-phosphate + ThiS-COSH + L-tyrosine = 4-methyl-5-(beta-hydroxyethyl)thiazole phosphate + 4-hydroxy-benzyl-alcohol + C1 of tyrosine + ThiS protein [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]