| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is aroF [H]
Identifier: 170078431
GI number: 170078431
Start: 1910084
End: 1911139
Strand: Direct
Name: aroF [H]
Synonym: SYNPCC7002_A1825
Alternate gene names: 170078431
Gene position: 1910084-1911139 (Clockwise)
Preceding gene: 170078430
Following gene: 170078432
Centisome position: 63.5
GC content: 51.52
Gene sequence:
>1056_bases ATGATCGTAGTCATGAAAGTTGGCACTCCTGAAGCCGAAATCAACCGTTTAGGGAGTGAGCTTAAAGAGTTAGGCCTGAC CCCCGAAAAAATTGTTGGGGCCCACAAAGTGGTCATTGGCTTAGTGGGAGATACCGCCACTTTTAACATTGAACTGATCC AAGAAATGAGCCCCTGGATCGAAAATGTACTCCGGGTCGAAAAGCCCTTTAAGCGGGTCAGTCTTGAGTACCGTCATGGT CAATACAGCGAGGTCGTTGTGCCTACTCCGAACGGGGATGTCACCTTCGGCCCCAATCATCCGGTGGTCGTCGTCGCTGG CCCTTGCTCCGTTGAAAATGAAGAAATGATCGTTGAAACCGCCCTCCGGGTCAAAGCAGCCGGGGCAAAATTCCTCCGGG GTGGGGCGTACAAGCCGAGAACTTCTCCCTATGCGTTCCAGGGCCACGGTGAAAGTGCTTTAGAATTGTTGGCGGCAGCA CGGGAAGCCTCCGGTCTAGGGATTATCACAGAAGTAATGGATACGGCGGACGTAGAAAAAATTGCTGAGGTTGCCGATGT GCTCCAAATCGGCGCGCGCAATATGCAAAACTTTGCCCTCTTGAAGAAGGTAGGAGCTCAGAATAAGCCGGTGTTGTTAA AGCGTGGGATGGCCGCCACCATCGACGACTGGTTAATGGCTGCAGAATATATTTTGGCGGAAGGAAATTCCCAGGTGATC CTCTGTGAACGGGGCATTCGCACCTTCGATAGTAAGTACACACGCAATGTTTTGGATCTATCGGTGATTCCGGTGTTGCG CAGTTTGACCCACTTACCGATGATGATCGATCCGAGCCACGGTACAGGGAAGTCTGAATTTGTTCTTTCCCTGGCTAAAG GGGCGATCGCCATTGGTACTGATTCGCTGATGATCGAAGTTCACCCCAACCCGAAGAAAGCCCTTTCCGATGGCCCCCAA TCCTTGACCCCAGAAGCGTTCGACCAGGTGATGCAAGAACTGGCAGAGGTTGAAAAATTAACGGGACGTGGCCAAAAGGA ATTGGCAACAGTTTAA
Upstream 100 bases:
>100_bases ACTTAGTTTTTAAGAACGTTATCCATAAAAAACGCCCTATTACATCGTTATTCCATAAATAAAATTTCTTTTACCTGTCG TAAATCTTCGAGGAAATACC
Downstream 100 bases:
>100_bases GGCCCCTGTGATGGCTGGTTAATGTCAGTACCTAACGTGATATCCCTGCTACTTGGAGTGGGGATTTTTTATTTACAAGT CAAGGTTGCCGCAAAAATCT
Product: 3-deoxy-7-phosphoheptulonate synthase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 351; Mature: 351
Protein sequence:
>351_residues MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ SLTPEAFDQVMQELAEVEKLTGRGQKELATV
Sequences:
>Translated_351_residues MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ SLTPEAFDQVMQELAEVEKLTGRGQKELATV >Mature_351_residues MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ SLTPEAFDQVMQELAEVEKLTGRGQKELATV
Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG2876
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787466, Length=281, Percent_Identity=25.9786476868327, Blast_Score=86, Evalue=4e-18,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006268 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 37987; Mature: 37987
Theoretical pI: Translated: 5.47; Mature: 5.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWI CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCEEEEHHHHHHHHHHH ENVLRVEKPFKRVSLEYRHGQYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVET HHHHHHHCCHHHHEEEECCCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHH ALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREASGLGIITEVMDTADVEK HHHHHHCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEE LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGT EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEEECC DSLMIEVHPNPKKALSDGPQSLTPEAFDQVMQELAEVEKLTGRGQKELATV CEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC >Mature Secondary Structure MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWI CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCEEEEHHHHHHHHHHH ENVLRVEKPFKRVSLEYRHGQYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVET HHHHHHHCCHHHHEEEECCCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHH ALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREASGLGIITEVMDTADVEK HHHHHHCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH IAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEE LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGT EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEEECC DSLMIEVHPNPKKALSDGPQSLTPEAFDQVMQELAEVEKLTGRGQKELATV CEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571; 12743122 [H]