Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is aroF [H]

Identifier: 170078431

GI number: 170078431

Start: 1910084

End: 1911139

Strand: Direct

Name: aroF [H]

Synonym: SYNPCC7002_A1825

Alternate gene names: 170078431

Gene position: 1910084-1911139 (Clockwise)

Preceding gene: 170078430

Following gene: 170078432

Centisome position: 63.5

GC content: 51.52

Gene sequence:

>1056_bases
ATGATCGTAGTCATGAAAGTTGGCACTCCTGAAGCCGAAATCAACCGTTTAGGGAGTGAGCTTAAAGAGTTAGGCCTGAC
CCCCGAAAAAATTGTTGGGGCCCACAAAGTGGTCATTGGCTTAGTGGGAGATACCGCCACTTTTAACATTGAACTGATCC
AAGAAATGAGCCCCTGGATCGAAAATGTACTCCGGGTCGAAAAGCCCTTTAAGCGGGTCAGTCTTGAGTACCGTCATGGT
CAATACAGCGAGGTCGTTGTGCCTACTCCGAACGGGGATGTCACCTTCGGCCCCAATCATCCGGTGGTCGTCGTCGCTGG
CCCTTGCTCCGTTGAAAATGAAGAAATGATCGTTGAAACCGCCCTCCGGGTCAAAGCAGCCGGGGCAAAATTCCTCCGGG
GTGGGGCGTACAAGCCGAGAACTTCTCCCTATGCGTTCCAGGGCCACGGTGAAAGTGCTTTAGAATTGTTGGCGGCAGCA
CGGGAAGCCTCCGGTCTAGGGATTATCACAGAAGTAATGGATACGGCGGACGTAGAAAAAATTGCTGAGGTTGCCGATGT
GCTCCAAATCGGCGCGCGCAATATGCAAAACTTTGCCCTCTTGAAGAAGGTAGGAGCTCAGAATAAGCCGGTGTTGTTAA
AGCGTGGGATGGCCGCCACCATCGACGACTGGTTAATGGCTGCAGAATATATTTTGGCGGAAGGAAATTCCCAGGTGATC
CTCTGTGAACGGGGCATTCGCACCTTCGATAGTAAGTACACACGCAATGTTTTGGATCTATCGGTGATTCCGGTGTTGCG
CAGTTTGACCCACTTACCGATGATGATCGATCCGAGCCACGGTACAGGGAAGTCTGAATTTGTTCTTTCCCTGGCTAAAG
GGGCGATCGCCATTGGTACTGATTCGCTGATGATCGAAGTTCACCCCAACCCGAAGAAAGCCCTTTCCGATGGCCCCCAA
TCCTTGACCCCAGAAGCGTTCGACCAGGTGATGCAAGAACTGGCAGAGGTTGAAAAATTAACGGGACGTGGCCAAAAGGA
ATTGGCAACAGTTTAA

Upstream 100 bases:

>100_bases
ACTTAGTTTTTAAGAACGTTATCCATAAAAAACGCCCTATTACATCGTTATTCCATAAATAAAATTTCTTTTACCTGTCG
TAAATCTTCGAGGAAATACC

Downstream 100 bases:

>100_bases
GGCCCCTGTGATGGCTGGTTAATGTCAGTACCTAACGTGATATCCCTGCTACTTGGAGTGGGGATTTTTTATTTACAAGT
CAAGGTTGCCGCAAAAATCT

Product: 3-deoxy-7-phosphoheptulonate synthase

Products: NA

Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG
QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA
REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI
LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ
SLTPEAFDQVMQELAEVEKLTGRGQKELATV

Sequences:

>Translated_351_residues
MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG
QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA
REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI
LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ
SLTPEAFDQVMQELAEVEKLTGRGQKELATV
>Mature_351_residues
MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWIENVLRVEKPFKRVSLEYRHG
QYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVETALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAA
REASGLGIITEVMDTADVEKIAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI
LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGTDSLMIEVHPNPKKALSDGPQ
SLTPEAFDQVMQELAEVEKLTGRGQKELATV

Specific function: Catalyzes the condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]

COG id: COG2876

COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I DAHP synthase family [H]

Homologues:

Organism=Escherichia coli, GI1787466, Length=281, Percent_Identity=25.9786476868327, Blast_Score=86, Evalue=4e-18,

Paralogues:

None

Copy number: 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006218
- InterPro:   IPR006268 [H]

Pfam domain/function: PF00793 DAHP_synth_1 [H]

EC number: =2.5.1.54 [H]

Molecular weight: Translated: 37987; Mature: 37987

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWI
CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCEEEEHHHHHHHHHHH
ENVLRVEKPFKRVSLEYRHGQYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVET
HHHHHHHCCHHHHEEEECCCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHH
ALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREASGLGIITEVMDTADVEK
HHHHHHCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEE
LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGT
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEEECC
DSLMIEVHPNPKKALSDGPQSLTPEAFDQVMQELAEVEKLTGRGQKELATV
CEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC
>Mature Secondary Structure
MIVVMKVGTPEAEINRLGSELKELGLTPEKIVGAHKVVIGLVGDTATFNIELIQEMSPWI
CEEEEECCCCHHHHHHHHHHHHHHCCCHHHHHCCEEEEEEEECCCEEEEHHHHHHHHHHH
ENVLRVEKPFKRVSLEYRHGQYSEVVVPTPNGDVTFGPNHPVVVVAGPCSVENEEMIVET
HHHHHHHCCHHHHEEEECCCCCCEEEEECCCCCEEECCCCCEEEEECCCCCCCCHHHHHH
ALRVKAAGAKFLRGGAYKPRTSPYAFQGHGESALELLAAAREASGLGIITEVMDTADVEK
HHHHHHCCHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IAEVADVLQIGARNMQNFALLKKVGAQNKPVLLKRGMAATIDDWLMAAEYILAEGNSQVI
HHHHHHHHHHHHCCHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCEEE
LCERGIRTFDSKYTRNVLDLSVIPVLRSLTHLPMMIDPSHGTGKSEFVLSLAKGAIAIGT
EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHCCEEEECC
DSLMIEVHPNPKKALSDGPQSLTPEAFDQVMQELAEVEKLTGRGQKELATV
CEEEEEECCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571; 12743122 [H]