| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078373
Identifier: 170078373
GI number: 170078373
Start: 1851659
End: 1852591
Strand: Direct
Name: 170078373
Synonym: SYNPCC7002_A1766
Alternate gene names: NA
Gene position: 1851659-1852591 (Clockwise)
Preceding gene: 170078364
Following gene: 170078374
Centisome position: 61.56
GC content: 50.16
Gene sequence:
>933_bases ATGCGCATTTTAATTATTGGTGGTACCCGGTTTATTGGGGTTTATCTCACCCAAGTTTTATTGGCGGCAGGCCACGAGGT AGTGCTGTTTAACCGGGGCAATCATCCGGCACCGATGGGCGTAGGGCAAATTATTGGCGATCGCCAAGAGCCGGCGCAAC TGAAGGAAAAACTGGCTGGCGAAACCTTTGACGCGATTTTTGATAATAATGGCAGGGAACTCGCCCATACCCAGCCCCTC GCCGAAATTTTTGCTGGAAAAGTGAAGCATTTTGTCTATGTCAGTTCCGCTGGCGTTTATCTGCCCACTGACCAACCGCC CCACAAAGAAGCCGATCCCGTTGATCCCAACAGCCGCCACAAGGGGAAGCACGAAACGGAGGCTTATTTGGCCCAGAGTG ATTTGCCCTGGACATCGATCCGTCCCACCTACATTTACGGCGCAAAAAATTACAATGACCTGGAAGCTTGGTTCTTTGAC CGCATCGTCCGCGATCGCCCGATTCCAATTCCTGGGGATGGGCAATTGATCACCCAGTTTGGCCATGTTTATGATCTGGC GACGGCCATGGCAGCGGTGCTAGATAATCCGAAAGCGATTGGACAAATTTACAATATTTCAGGCGATCGCTTTGTCACTT TTACCGGACTCGCAAAAGCCTGCGCCGTAGCAGCAGGGAAAGATCCCGATACGTTGGCATTGGTTTATTACAACCCCAAA CAATTCGACCTCGGCAAACGCAAAGCCTTTCCGATCCGCGCCCAGCACTTCATGGCAGATATCAATAAAGCCCTGAATGA CCTCGACTGGCAACCGAAATATGATCTAGTGAGTGGCTTAAAAGATTCTTTCCAGAATGACTATCTCGCCAATGGTCGAG ACAAGGTTGACCTCGACTTCAGTCTTGATGACCAAATTTTAGGACAGCGATAG
Upstream 100 bases:
>100_bases GCCAACCCCTTGAGACGAGTTTTTCTGATACGTCGCTCCAGTTCTGGAACCCCATCCGATACACTGAATGCTTAAGGCGA TCGCTGTTTGGGAAAAAATT
Downstream 100 bases:
>100_bases GAACCCGCCCATGGCTACTAGCACCCTCACCGACATTTACCGTTTCATTCAACAGGAAATTCCCAGCGCGACAGGCGATC GCCTCAACGCAACAACCGAT
Product: NAD dependent epimerase/dehydratase family protein
Products: NA
Alternate protein names: Reductase; Isoflavone Reductase; Nucleoside-Diphosphate-Sugar Epimerase; Nucleotide Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; DTDP-Glucose 4 6-Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; UDP-Glucose 4-Epimerase; NDP-Glucose 4-Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; Carbohydrate Epimerase; Nucleotide Sugar Epimerase/Dehydratase; Methyltransferase FkbM; Sugar Dehydratase; Dtdpglucose 4 6-Dehydratase-Like Protein; NAD-Dependent Protein; VI Polysaccharide Biosynthesis Protein VipB/TviC; Lipoprotein
Number of amino acids: Translated: 310; Mature: 310
Protein sequence:
>310_residues MRILIIGGTRFIGVYLTQVLLAAGHEVVLFNRGNHPAPMGVGQIIGDRQEPAQLKEKLAGETFDAIFDNNGRELAHTQPL AEIFAGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRHKGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFD RIVRDRPIPIPGDGQLITQFGHVYDLATAMAAVLDNPKAIGQIYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDFSLDDQILGQR
Sequences:
>Translated_310_residues MRILIIGGTRFIGVYLTQVLLAAGHEVVLFNRGNHPAPMGVGQIIGDRQEPAQLKEKLAGETFDAIFDNNGRELAHTQPL AEIFAGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRHKGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFD RIVRDRPIPIPGDGQLITQFGHVYDLATAMAAVLDNPKAIGQIYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDFSLDDQILGQR >Mature_310_residues MRILIIGGTRFIGVYLTQVLLAAGHEVVLFNRGNHPAPMGVGQIIGDRQEPAQLKEKLAGETFDAIFDNNGRELAHTQPL AEIFAGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRHKGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFD RIVRDRPIPIPGDGQLITQFGHVYDLATAMAAVLDNPKAIGQIYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDFSLDDQILGQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34515; Mature: 34515
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILIIGGTRFIGVYLTQVLLAAGHEVVLFNRGNHPAPMGVGQIIGDRQEPAQLKEKLAG CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHCC ETFDAIFDNNGRELAHTQPLAEIFAGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRH CHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCC KGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFDRIVRDRPIPIPGDGQLITQF CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH GHVYDLATAMAAVLDNPKAIGQIYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK HHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCC QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCEEEEEC SLDDQILGQR CCCHHHHCCC >Mature Secondary Structure MRILIIGGTRFIGVYLTQVLLAAGHEVVLFNRGNHPAPMGVGQIIGDRQEPAQLKEKLAG CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCHHHHHHHHCC ETFDAIFDNNGRELAHTQPLAEIFAGKVKHFVYVSSAGVYLPTDQPPHKEADPVDPNSRH CHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCEECCCCCCCCCCCCCCCCCCCC KGKHETEAYLAQSDLPWTSIRPTYIYGAKNYNDLEAWFFDRIVRDRPIPIPGDGQLITQF CCCCHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHH GHVYDLATAMAAVLDNPKAIGQIYNISGDRFVTFTGLAKACAVAAGKDPDTLALVYYNPK HHHHHHHHHHHHHHCCCHHHHEEEECCCCEEEEEHHHHHHHHHHCCCCCCEEEEEEECCC QFDLGKRKAFPIRAQHFMADINKALNDLDWQPKYDLVSGLKDSFQNDYLANGRDKVDLDF CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHCCCCCEEEEEC SLDDQILGQR CCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA