| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078374
Identifier: 170078374
GI number: 170078374
Start: 1852602
End: 1853045
Strand: Direct
Name: 170078374
Synonym: SYNPCC7002_A1767
Alternate gene names: NA
Gene position: 1852602-1853045 (Clockwise)
Preceding gene: 170078373
Following gene: 170078375
Centisome position: 61.59
GC content: 47.52
Gene sequence:
>444_bases ATGGCTACTAGCACCCTCACCGACATTTACCGTTTCATTCAACAGGAAATTCCCAGCGCGACAGGCGATCGCCTCAACGC AACAACCGATCTTTTTGGCACCTTTGACATCCAGGCCGATGACTGTGCCACCTTTATAGAAAAATTCGCCCAGAAATTCA AAGTCGATCTTGATGGCTACCTTTGGTATTTTCACCACGGCGAAGCGGGCCTTAACCTTGGTGGATTTTTGATCAAGCCT CCCTACGAACGGGTTGAACGCATTCCTATCACCCCAGAAATTTTATTAAAAGCGGCCACCAAGCGCCGCTGGAAACTCAG CTATCCCGACCACACCCTCCCGAAAAAACGTTGGGATATGGTGGTCAATAAAATTATTCTGTTCCTCGTCTTTTTCTACA TCCTGAATCGTTTTGCGCCCCTCCTCATCGAAAAATTCACCTAA
Upstream 100 bases:
>100_bases GATTCTTTCCAGAATGACTATCTCGCCAATGGTCGAGACAAGGTTGACCTCGACTTCAGTCTTGATGACCAAATTTTAGG ACAGCGATAGGAACCCGCCC
Downstream 100 bases:
>100_bases AGGCGTTTACCATACGTCGAAGCAGTATTCGGGAAAATGTAGTGATGAGTGCAAATCCAGAGGTAATCGTCATTGGTAGC GGCATTGGCGGGCTTTGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MATSTLTDIYRFIQQEIPSATGDRLNATTDLFGTFDIQADDCATFIEKFAQKFKVDLDGYLWYFHHGEAGLNLGGFLIKP PYERVERIPITPEILLKAATKRRWKLSYPDHTLPKKRWDMVVNKIILFLVFFYILNRFAPLLIEKFT
Sequences:
>Translated_147_residues MATSTLTDIYRFIQQEIPSATGDRLNATTDLFGTFDIQADDCATFIEKFAQKFKVDLDGYLWYFHHGEAGLNLGGFLIKP PYERVERIPITPEILLKAATKRRWKLSYPDHTLPKKRWDMVVNKIILFLVFFYILNRFAPLLIEKFT >Mature_146_residues ATSTLTDIYRFIQQEIPSATGDRLNATTDLFGTFDIQADDCATFIEKFAQKFKVDLDGYLWYFHHGEAGLNLGGFLIKPP YERVERIPITPEILLKAATKRRWKLSYPDHTLPKKRWDMVVNKIILFLVFFYILNRFAPLLIEKFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17181; Mature: 17050
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATSTLTDIYRFIQQEIPSATGDRLNATTDLFGTFDIQADDCATFIEKFAQKFKVDLDGY CCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCE LWYFHHGEAGLNLGGFLIKPPYERVERIPITPEILLKAATKRRWKLSYPDHTLPKKRWDM EEEEECCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHH VVNKIILFLVFFYILNRFAPLLIEKFT HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ATSTLTDIYRFIQQEIPSATGDRLNATTDLFGTFDIQADDCATFIEKFAQKFKVDLDGY CCHHHHHHHHHHHHHCCCCCCCCCCCHHHHCEEECCCHHHHHHHHHHHHHHHCCCCCCE LWYFHHGEAGLNLGGFLIKPPYERVERIPITPEILLKAATKRRWKLSYPDHTLPKKRWDM EEEEECCCCCCCCCCEEECCCHHHHHCCCCCHHHHHHHHHCCCEEECCCCCCCCHHHHHH VVNKIILFLVFFYILNRFAPLLIEKFT HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA