| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078364
Identifier: 170078364
GI number: 170078364
Start: 1845150
End: 1845854
Strand: Direct
Name: 170078364
Synonym: SYNPCC7002_A1757
Alternate gene names: NA
Gene position: 1845150-1845854 (Clockwise)
Preceding gene: 170078363
Following gene: 170078373
Centisome position: 61.34
GC content: 50.92
Gene sequence:
>705_bases ATGGATGTCAATCATCTCGTCGCGGAAATCTTTTCCCCAGCCCTCCGGATGCCCCTGGGAACGGTCATCACTTATCTGGG GGCGCTGTTGGCGATCGCCGAAGGTCTCAGTCGCAAAAATCACCTAAGCCCAGAACTGACCCGCAAAATTGTCCATATCG GCAGTGGTAATGTCATTCTCCTCGCCTGGTGGTTTGATATTCCGATGGAAATTGGCATTGCTGCCGCCTTTATTGCAGGC TTAATTGCCCTGATTTCCTACTTCCTGCCGATTTTACCCAGCGTGAATAGCGTCGGTCGCCAGAGCCTCGGCACCTTTTT CTATGCCCTCAGTATGGGGGTGTTGATCTGGTGGTTTTGGTCGATTCAGCAACCTGTATTTGCGGTGCTTGGCATTTTGG TGATGGCCTGGGGCGATGGTTTGGCTGCCGTGGTCGGTAGCCAATTGGGCAAACATCCCTACGAAATTCTTGGCAACAAA AAAAGCCTCGAAGGCACCGCCACAATGTTTGGGGTGGGTTTCTTGATTTGCGGTTTATTATTTCTCGGTTTTGACCTCAT GCTTTGGCAAAAAGCGGCGATCGCCCTCGTTGTTGCCCTTTGTTCTACCTTGCTCGAAAGCATTGCCCAGTTTGGCATTG ATAATTTTTTGGTGCCCGTCGGCAGTGCGGCGATCGCCTTTTTACTCGTACAAGCTTTGATTTAG
Upstream 100 bases:
>100_bases TACGGATGATCCCACCATTTGTGAACGCTGTAATGCAGCCTTAGCCGGTCAATTCTAAGTTGCGCTTTAGGGGTGGGAGT AATCTCGCCCTTAATTTTTT
Downstream 100 bases:
>100_bases GATTCATCTACCGAAACCGAAGGGATATCCACCGTTGCCGTCGTTTCTCCCTGGGTTGTCGTTTTCCCTTGGGAATTTTC TTGGCGGGCTTGGAAAAAAG
Product: putative phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: Dolichol Kinase; Integral Membrane Protein; Phosphatidate Cytidylyltransferase Family Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MDVNHLVAEIFSPALRMPLGTVITYLGALLAIAEGLSRKNHLSPELTRKIVHIGSGNVILLAWWFDIPMEIGIAAAFIAG LIALISYFLPILPSVNSVGRQSLGTFFYALSMGVLIWWFWSIQQPVFAVLGILVMAWGDGLAAVVGSQLGKHPYEILGNK KSLEGTATMFGVGFLICGLLFLGFDLMLWQKAAIALVVALCSTLLESIAQFGIDNFLVPVGSAAIAFLLVQALI
Sequences:
>Translated_234_residues MDVNHLVAEIFSPALRMPLGTVITYLGALLAIAEGLSRKNHLSPELTRKIVHIGSGNVILLAWWFDIPMEIGIAAAFIAG LIALISYFLPILPSVNSVGRQSLGTFFYALSMGVLIWWFWSIQQPVFAVLGILVMAWGDGLAAVVGSQLGKHPYEILGNK KSLEGTATMFGVGFLICGLLFLGFDLMLWQKAAIALVVALCSTLLESIAQFGIDNFLVPVGSAAIAFLLVQALI >Mature_234_residues MDVNHLVAEIFSPALRMPLGTVITYLGALLAIAEGLSRKNHLSPELTRKIVHIGSGNVILLAWWFDIPMEIGIAAAFIAG LIALISYFLPILPSVNSVGRQSLGTFFYALSMGVLIWWFWSIQQPVFAVLGILVMAWGDGLAAVVGSQLGKHPYEILGNK KSLEGTATMFGVGFLICGLLFLGFDLMLWQKAAIALVVALCSTLLESIAQFGIDNFLVPVGSAAIAFLLVQALI
Specific function: Unknown
COG id: COG0170
COG function: function code I; Dolichol kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25144; Mature: 25144
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVNHLVAEIFSPALRMPLGTVITYLGALLAIAEGLSRKNHLSPELTRKIVHIGSGNVIL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEE LAWWFDIPMEIGIAAAFIAGLIALISYFLPILPSVNSVGRQSLGTFFYALSMGVLIWWFW EEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SIQQPVFAVLGILVMAWGDGLAAVVGSQLGKHPYEILGNKKSLEGTATMFGVGFLICGLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH FLGFDLMLWQKAAIALVVALCSTLLESIAQFGIDNFLVPVGSAAIAFLLVQALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MDVNHLVAEIFSPALRMPLGTVITYLGALLAIAEGLSRKNHLSPELTRKIVHIGSGNVIL CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCEEE LAWWFDIPMEIGIAAAFIAGLIALISYFLPILPSVNSVGRQSLGTFFYALSMGVLIWWFW EEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH SIQQPVFAVLGILVMAWGDGLAAVVGSQLGKHPYEILGNKKSLEGTATMFGVGFLICGLL HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHH FLGFDLMLWQKAAIALVVALCSTLLESIAQFGIDNFLVPVGSAAIAFLLVQALI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA