Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is ssuA [C]

Identifier: 170078355

GI number: 170078355

Start: 1833810

End: 1834883

Strand: Direct

Name: ssuA [C]

Synonym: SYNPCC7002_A1748

Alternate gene names: 170078355

Gene position: 1833810-1834883 (Clockwise)

Preceding gene: 170078354

Following gene: 170078356

Centisome position: 60.96

GC content: 47.21

Gene sequence:

>1074_bases
TTGATCCCTTGCGTTTATTCTTGTCATTTTCCTATGCTAAAACTGCCTAGTCTTCTGATCCGACCGGCGCTATTTTGTGC
GGGTCTTGCCTTGACCATCGGCTGCCAAAGTACACCGCCCACAACAACAGGTGAAACTCCGGAAACTCCAACAGCGGAAA
CAGAAACAATTACCCTTGGTTTTAGCGCATGGCCCGGTTGGTTTCCTTGGCAAATTGCCGCAGAAAAAGGCCTATTTGAA
GCGAATGGCGTTGATGTAAACTTGACTTGGTTTGATGGTTATTTAGATTCAATTAATGCTTTTGCGGCGGGACAGCTAGA
CGCAAATACCCAAACCCTGAATGACACGATTAGTTCAGTGGCAGCGGGTTCTGAACAAGTGATTGTTCTGGTGAATGATA
ACTCCACAGGGAATGATCAAATTATTGTCAGCGAAGGCATTAATAGTATTGAGGATTTACAGGGAAAAACCATCGCCATT
GAAGAGGGCACCGTCGATCATTTTCTCCTATTGCTGGCACTCCAGGAAGCTGGCCTTGGCCCCGATGATGTGATTATCAA
ACCCCTAGAAACGGGGGCCGCCGCTGCTGCATTTGTCGCTGGTCAGGTGGATGCGGTGGGAGCCTTTGCCCCTTTTACGA
CCCAGGCTTTAGAGCGGGAAGGCAGTAAAATCCTCATTTCTTCGGCAGATTTTCCGGGGGCAATTCCGGATCATTTGGTG
GTCAGTCGTGAGCTAATTCAAAATAATCCCGAAGCGGTTCAAGGGTTAGTGGATACTTGGTTTGCGGTGCTAGATTTCAT
TGAAGAAAATCCAGAGGAAGCCCTGGAAATCATGGCGGCGCGAGCCAATGTTTCCGTCGAAGAATATCAAGAATATGATG
CGGGAACGACAATTTTTAGCCTTGAAGATAACCTAATAGCCTTTGATTCTACAGAAGAAAGCATGATCTCCCTGAACTAC
GCCGCCCAGGAAATTAATACTTTCTTGGTGGATGCGGGGTTAATTGAGGCGCCAGCGGATCTCAGTGGTTTATTTGACCC
TTCTTTCGTTAAAGCCTACGCAGAAAAACAGTAG

Upstream 100 bases:

>100_bases
TGGGTTAAAAAAAGTTGTCATCGGGAAGATGTAATGAAAGTTACAGCATAATTTGTCCGAAAACAGGATAAACAACAGGC
AAGGTGCGATCGCCTTTTAA

Downstream 100 bases:

>100_bases
CTTTTTGCATCCCTCGGTCTTCTCACTCCGGGGGATTTTTAAAATCCATTATTTTGGCGATCGCCATGACTAAAGCGCCC
GTTATCAAACCCTCTTTCCG

Product: ABC transporter, nitrate-like substrate binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE
ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI
EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV
VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY
AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ

Sequences:

>Translated_357_residues
MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE
ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI
EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV
VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY
AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ
>Mature_357_residues
MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLGFSAWPGWFPWQIAAEKGLFE
ANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSVAAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAI
EEGTVDHFLLLLALQEAGLGPDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV
VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFSLEDNLIAFDSTEESMISLNY
AAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ

Specific function: Probably part of an ABC transporter complex [H]

COG id: COG0715

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]

Homologues:

Organism=Escherichia coli, GI87081803, Length=251, Percent_Identity=25.0996015936255, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010067
- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 38131; Mature: 38131

Theoretical pI: Translated: 3.59; Mature: 3.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLG
CCCCEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
FSAWPGWFPWQIAAEKGLFEANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSV
ECCCCCCCCEEEHHCCCCEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH
AAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAIEEGTVDHFLLLLALQEAGLG
HCCCCEEEEEECCCCCCCCEEEEECCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCC
PDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV
CCCEEEEECCCCCHHHHHHHCCCHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH
VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEE
LEDNLIAFDSTEESMISLNYAAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ
ECCCEEEECCCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MIPCVYSCHFPMLKLPSLLIRPALFCAGLALTIGCQSTPPTTTGETPETPTAETETITLG
CCCCEEECCCCHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCCCCCCCCCCCEEEEEE
FSAWPGWFPWQIAAEKGLFEANGVDVNLTWFDGYLDSINAFAAGQLDANTQTLNDTISSV
ECCCCCCCCEEEHHCCCCEECCCEEEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHHHH
AAGSEQVIVLVNDNSTGNDQIIVSEGINSIEDLQGKTIAIEEGTVDHFLLLLALQEAGLG
HCCCCEEEEEECCCCCCCCEEEEECCCCHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCC
PDDVIIKPLETGAAAAAFVAGQVDAVGAFAPFTTQALEREGSKILISSADFPGAIPDHLV
CCCEEEEECCCCCHHHHHHHCCCHHCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCHHHH
VSRELIQNNPEAVQGLVDTWFAVLDFIEENPEEALEIMAARANVSVEEYQEYDAGTTIFS
HHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHCCCCCEEEE
LEDNLIAFDSTEESMISLNYAAQEINTFLVDAGLIEAPADLSGLFDPSFVKAYAEKQ
ECCCEEEECCCCCCEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]