Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170078318

Identifier: 170078318

GI number: 170078318

Start: 1796757

End: 1797905

Strand: Reverse

Name: 170078318

Synonym: SYNPCC7002_A1711

Alternate gene names: NA

Gene position: 1797905-1796757 (Counterclockwise)

Preceding gene: 170078319

Following gene: 170078316

Centisome position: 59.77

GC content: 45.6

Gene sequence:

>1149_bases
ATGCCCATCGATAACGCACCACAATTAGAGCGTCTACTCTCTTTAGTCAAGGAAGGTCAGCTTACCCAGGAGGAGTTTGG
TGTACTCCAGGCTCACTTTGACCTCAAAATAACTCCCCCCCCTCAAGGTACGACGAATCAGACGACTGCGGCCCCAGAGT
CCCCATCGACGGAAGAAAAAACCGCCGATTCTTTTTGGAAGAAGCCGATTTTTGGCAACAAGAGCTTGGTGGAGAAGGTC
ACAAACTATTTTGCGAAGCCTCCGGTTCCCCCTTATTCTCTTGATCGCTATGGGCAGCTTTGGAAGCAACTTGAAACGAA
GGCGATCACTCTCCAGGGCTTAGAAAATCGAAAATTCGGCAATCAGGAGTTCCTTGATTTCTTTCGGATTCGGATTTTAA
TCGATCTGAACATGGGCACCTTTAAAAATCTCAAGAATACGATTGATTTGTTTGAGGTGATGTTATTTTCCCTTGAAAGT
TTTGTCTTGATTAACGAAACGGAATTTCTGTATCGCAGCCCGACTCAGCTTAAGGTCTATGAGGCGATCGCCGATATCTT
AGACAACCACACCGACACCACCGAGATTGTCCTTGAAATGAAAGCGAAAGTCACCCCTTTCCTCAAGGAATTTAAAACCG
ATGAGGGATTGCGAGTTACCAAAAACTATATTTTGGCGATTAAAGAGGTCAGTCGCTATAAAAGTGGCGTGAAGTTGCTG
AACATTTTGAGAAACCTGAAATCCCGCTATTCTCTGCTGTTATCAACCTTTAAACTAGCTCAGGAAGTATTGACACAGCC
GATTGGCACCGATCTAGAGGTTTTGGAGCAGCGGGTTTCGGAGATCGAAGAAACGGTTTACACGCTGTGTTCGGCGATGG
GGATGCCGAGGAACCAAAATAACCTTTTGGGCCATGTGAAAGTGTTTCACTTTCTCGCACTGAACTACCGCAATAAAAAC
GCAGGGGCTGAGTTTAAGGCTCTCCTGGGGGATCTCAGAAAGTGGGAGCAGATTGCTGGGGAGTTACAGAGCATTAAAGA
TACCTATCCTCCCAATGATTATGATGTGCCGGATGTTTTTAAGCAGGATTTCCCCGGTTTACCCCTCTATCAGAAATACC
AGCGTTTTTTGAATATTCGTAAGGCATAG

Upstream 100 bases:

>100_bases
CGGTTTCGTAAAAGATCAACAACGCAATGTAACAAACCCCAGGGGAGAGATACACTACATGGTAGCGCTGGGGTTATTTG
ATCAAATCAGTGAGGAAAGC

Downstream 100 bases:

>100_bases
GGGACGACGGTGCTGGATTTTTTGAGGGGTCAAGACTCGGCATCCCTGGGGAATTGGCAAAGGGCTTGTTGGGCGATCGC
CTGCCAGGATTGTCCAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MPIDNAPQLERLLSLVKEGQLTQEEFGVLQAHFDLKITPPPQGTTNQTTAAPESPSTEEKTADSFWKKPIFGNKSLVEKV
TNYFAKPPVPPYSLDRYGQLWKQLETKAITLQGLENRKFGNQEFLDFFRIRILIDLNMGTFKNLKNTIDLFEVMLFSLES
FVLINETEFLYRSPTQLKVYEAIADILDNHTDTTEIVLEMKAKVTPFLKEFKTDEGLRVTKNYILAIKEVSRYKSGVKLL
NILRNLKSRYSLLLSTFKLAQEVLTQPIGTDLEVLEQRVSEIEETVYTLCSAMGMPRNQNNLLGHVKVFHFLALNYRNKN
AGAEFKALLGDLRKWEQIAGELQSIKDTYPPNDYDVPDVFKQDFPGLPLYQKYQRFLNIRKA

Sequences:

>Translated_382_residues
MPIDNAPQLERLLSLVKEGQLTQEEFGVLQAHFDLKITPPPQGTTNQTTAAPESPSTEEKTADSFWKKPIFGNKSLVEKV
TNYFAKPPVPPYSLDRYGQLWKQLETKAITLQGLENRKFGNQEFLDFFRIRILIDLNMGTFKNLKNTIDLFEVMLFSLES
FVLINETEFLYRSPTQLKVYEAIADILDNHTDTTEIVLEMKAKVTPFLKEFKTDEGLRVTKNYILAIKEVSRYKSGVKLL
NILRNLKSRYSLLLSTFKLAQEVLTQPIGTDLEVLEQRVSEIEETVYTLCSAMGMPRNQNNLLGHVKVFHFLALNYRNKN
AGAEFKALLGDLRKWEQIAGELQSIKDTYPPNDYDVPDVFKQDFPGLPLYQKYQRFLNIRKA
>Mature_381_residues
PIDNAPQLERLLSLVKEGQLTQEEFGVLQAHFDLKITPPPQGTTNQTTAAPESPSTEEKTADSFWKKPIFGNKSLVEKVT
NYFAKPPVPPYSLDRYGQLWKQLETKAITLQGLENRKFGNQEFLDFFRIRILIDLNMGTFKNLKNTIDLFEVMLFSLESF
VLINETEFLYRSPTQLKVYEAIADILDNHTDTTEIVLEMKAKVTPFLKEFKTDEGLRVTKNYILAIKEVSRYKSGVKLLN
ILRNLKSRYSLLLSTFKLAQEVLTQPIGTDLEVLEQRVSEIEETVYTLCSAMGMPRNQNNLLGHVKVFHFLALNYRNKNA
GAEFKALLGDLRKWEQIAGELQSIKDTYPPNDYDVPDVFKQDFPGLPLYQKYQRFLNIRKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43990; Mature: 43859

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIDNAPQLERLLSLVKEGQLTQEEFGVLQAHFDLKITPPPQGTTNQTTAAPESPSTEEK
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
TADSFWKKPIFGNKSLVEKVTNYFAKPPVPPYSLDRYGQLWKQLETKAITLQGLENRKFG
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
NQEFLDFFRIRILIDLNMGTFKNLKNTIDLFEVMLFSLESFVLINETEFLYRSPTQLKVY
CHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCCHHHHH
EAIADILDNHTDTTEIVLEMKAKVTPFLKEFKTDEGLRVTKNYILAIKEVSRYKSGVKLL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NILRNLKSRYSLLLSTFKLAQEVLTQPIGTDLEVLEQRVSEIEETVYTLCSAMGMPRNQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLLGHVKVFHFLALNYRNKNAGAEFKALLGDLRKWEQIAGELQSIKDTYPPNDYDVPDVF
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KQDFPGLPLYQKYQRFLNIRKA
HHCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
PIDNAPQLERLLSLVKEGQLTQEEFGVLQAHFDLKITPPPQGTTNQTTAAPESPSTEEK
CCCCCHHHHHHHHHHHCCCCCHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
TADSFWKKPIFGNKSLVEKVTNYFAKPPVPPYSLDRYGQLWKQLETKAITLQGLENRKFG
HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCC
NQEFLDFFRIRILIDLNMGTFKNLKNTIDLFEVMLFSLESFVLINETEFLYRSPTQLKVY
CHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHCCCCHHHHH
EAIADILDNHTDTTEIVLEMKAKVTPFLKEFKTDEGLRVTKNYILAIKEVSRYKSGVKLL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
NILRNLKSRYSLLLSTFKLAQEVLTQPIGTDLEVLEQRVSEIEETVYTLCSAMGMPRNQN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
NLLGHVKVFHFLALNYRNKNAGAEFKALLGDLRKWEQIAGELQSIKDTYPPNDYDVPDVF
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
KQDFPGLPLYQKYQRFLNIRKA
HHCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA