| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078187
Identifier: 170078187
GI number: 170078187
Start: 1661502
End: 1662014
Strand: Direct
Name: 170078187
Synonym: SYNPCC7002_A1578
Alternate gene names: NA
Gene position: 1661502-1662014 (Clockwise)
Preceding gene: 170078186
Following gene: 170078189
Centisome position: 55.24
GC content: 46.0
Gene sequence:
>513_bases ATGTTCAACTACGCCCTCAAAAAGCAACTTTTTTCCCTCAACTTATCGGCTATTGTCATGATAATCTTGGGGTTTTGGTT GAGTGCCTCTTTCCTCCTCGATTTTGTGATCATTCCTGTGTTTTCAATGACCGGGATGATGGCTGACAGCGGCTTTATCA GCACCGGATATGTTTTGTTTGGGGTGTTTAACCGTTTGGAGGTGGTCTGTGCCGCTGGGATCTTAACGATCTTTTTTGGG TTTAAATTTGAACATCTTTTTGGCGATCGCCAAGCCTTAAATGCCCTCGTCATTGCCAGTATCCTGTTAAATATTGCTTT GCTTTATACCTATTTGATTACGCCTCAGTTGGCTGGCTTTGGCCTAGAAATGACCGGATTCAATGGCACGGCAACGATGC CTTTACAGATGTCAGTGTGGCACAGTTTGTATTGGGTCTTAGAGGCCGCGAAATTCATGTTGGGGATCACTTTGCTGCGG TGGTGCTACCGTCGTGCCTGTGCGATCGCCTAA
Upstream 100 bases:
>100_bases GAGTATTACTAGATTATGTCGTTTTGGGGCAATGCTACCGATGGAGTTCCCTAAGCTTTTAAGCTTAAAAAAGTAAGGCC CAGTTTCGGGAGAAGAAACC
Downstream 100 bases:
>100_bases ACAATCAATTGACTTTTTAAGTAAAACGATGCCGCCACCAGGCGGTATTTTTATGGGAAATTAGGTTTTCGAGAAGCCAA TTTATCCGCCAAGCGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 170
Protein sequence:
>170_residues MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR WCYRRACAIA
Sequences:
>Translated_170_residues MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR WCYRRACAIA >Mature_170_residues MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLFGVFNRLEVVCAAGILTIFFG FKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGFGLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLR WCYRRACAIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19014; Mature: 19014
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLF CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVFNRLEVVCAAGILTIFFGFKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLRWCYRRACAIA CEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFNYALKKQLFSLNLSAIVMIILGFWLSASFLLDFVIIPVFSMTGMMADSGFISTGYVLF CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH GVFNRLEVVCAAGILTIFFGFKFEHLFGDRQALNALVIASILLNIALLYTYLITPQLAGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GLEMTGFNGTATMPLQMSVWHSLYWVLEAAKFMLGITLLRWCYRRACAIA CEEECCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA