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The map label for this gene is ycdJ [C]

Identifier: 170078142

GI number: 170078142

Start: 1617346

End: 1618194

Strand: Reverse

Name: ycdJ [C]

Synonym: SYNPCC7002_A1533

Alternate gene names: 170078142

Gene position: 1618194-1617346 (Counterclockwise)

Preceding gene: 170078143

Following gene: 170078141

Centisome position: 53.8

GC content: 53.95

Gene sequence:

>849_bases
ATGGCGATCGCCCAGGTGCGGGGAGTCCCCCACTATTACGAATGGATTTGTTGCGGGGGCCGCGATCTTCCCAAACCAGT
GATGTTATTTGTCCACGGTTGGGGCGGGTCGAGCCATTATTGGCGCAGCACTGCCACGGCCTTCAGTGAATCTTTCCACT
GTCTGATCTATGACCTGCGGGGCTTTGGTCGTTCTGAGCTCCCCGTCGATTACAGTGGTGACTATGCCCTAGACGATTAT
GCTCTGGATCTAGAAGTACTGCTGCGGCAGTTAGACATCAACGGCAAAATGATTCTCAATGCCCATTCCATGGGGGCTTC
CATCGGGGCAATTTTTGCGGCGCAGTTTCCCCAACGCCTAGACCGGGCCATTTTGAACTGCAACGGGATTTTTGAATATG
ATGCCCGCGCCTTTGGGACGTTTCAGAAAATTGCTGGCACCATTGTGCGCCTACGGTTTCCGTGGTTGCGTCAGGTACCG
GGGCTGGATCGGTTGGCGATCGCCCGTTTTTTGCAGCAACCAATTGCGCCCACAGAACGGCGGCAATTCCTGGAGGATTT
TTTGAGCGCTGATAATCGCGCCGCCGCTGGCACCCTGCTAGCTTCGGTGAATGAAATGATGGTGACCCGCTTGCCCCAGG
CATTTCGCAATATCCAATGTCCGACCCTGTTCCTCGCCGGGGAAAAAGATCAAATTATTCCGGCGGCCATGGCGAAAAGG
GCGATCGCCCTTAACCCAAACTTTCAGTACATTGAAATACCCCAGGTGGGACACTTCCCGATGCTCGAAAATCCCCACCT
TTATCAGGCCGAAATCCAGCAATTTCTTAGGGACAAAATTCCCGGATAG

Upstream 100 bases:

>100_bases
ACCGCTGCACGATTACACCGGAAATGGTCGAAAAACGCTCCACAGCTGAGTTGTTACTCCATCCGTCCTCCTTACCCAAA
CCAGAATCTGCTTAGGGCCA

Downstream 100 bases:

>100_bases
TATTTATTCTTGGGATCCCTCAAAGAATGATACGCTCTAACAGAACATCAAAAATTGACGAGAAAATTCTGATGCGTATT
TTGTTTGTTTCTGCCGAGGC

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAIAQVRGVPHYYEWICCGGRDLPKPVMLFVHGWGGSSHYWRSTATAFSESFHCLIYDLRGFGRSELPVDYSGDYALDDY
ALDLEVLLRQLDINGKMILNAHSMGASIGAIFAAQFPQRLDRAILNCNGIFEYDARAFGTFQKIAGTIVRLRFPWLRQVP
GLDRLAIARFLQQPIAPTERRQFLEDFLSADNRAAAGTLLASVNEMMVTRLPQAFRNIQCPTLFLAGEKDQIIPAAMAKR
AIALNPNFQYIEIPQVGHFPMLENPHLYQAEIQQFLRDKIPG

Sequences:

>Translated_282_residues
MAIAQVRGVPHYYEWICCGGRDLPKPVMLFVHGWGGSSHYWRSTATAFSESFHCLIYDLRGFGRSELPVDYSGDYALDDY
ALDLEVLLRQLDINGKMILNAHSMGASIGAIFAAQFPQRLDRAILNCNGIFEYDARAFGTFQKIAGTIVRLRFPWLRQVP
GLDRLAIARFLQQPIAPTERRQFLEDFLSADNRAAAGTLLASVNEMMVTRLPQAFRNIQCPTLFLAGEKDQIIPAAMAKR
AIALNPNFQYIEIPQVGHFPMLENPHLYQAEIQQFLRDKIPG
>Mature_281_residues
AIAQVRGVPHYYEWICCGGRDLPKPVMLFVHGWGGSSHYWRSTATAFSESFHCLIYDLRGFGRSELPVDYSGDYALDDYA
LDLEVLLRQLDINGKMILNAHSMGASIGAIFAAQFPQRLDRAILNCNGIFEYDARAFGTFQKIAGTIVRLRFPWLRQVPG
LDRLAIARFLQQPIAPTERRQFLEDFLSADNRAAAGTLLASVNEMMVTRLPQAFRNIQCPTLFLAGEKDQIIPAAMAKRA
IALNPNFQYIEIPQVGHFPMLENPHLYQAEIQQFLRDKIPG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI218777840, Length=272, Percent_Identity=25.3676470588235, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI13376164, Length=272, Percent_Identity=25.3676470588235, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI189027141, Length=280, Percent_Identity=23.5714285714286, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI1787244, Length=252, Percent_Identity=23.015873015873, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 31837; Mature: 31706

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAQVRGVPHYYEWICCGGRDLPKPVMLFVHGWGGSSHYWRSTATAFSESFHCLIYDLR
CCCHHHCCCCHHHHEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEC
GFGRSELPVDYSGDYALDDYALDLEVLLRQLDINGKMILNAHSMGASIGAIFAAQFPQRL
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHH
DRAILNCNGIFEYDARAFGTFQKIAGTIVRLRFPWLRQVPGLDRLAIARFLQQPIAPTER
HHHHHCCCCEEEECHHHHHHHHHHHHHHHHEECCHHHHCCCCHHHHHHHHHHCCCCCHHH
RQFLEDFLSADNRAAAGTLLASVNEMMVTRLPQAFRNIQCPTLFLAGEKDQIIPAAMAKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCC
AIALNPNFQYIEIPQVGHFPMLENPHLYQAEIQQFLRDKIPG
EEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure 
AIAQVRGVPHYYEWICCGGRDLPKPVMLFVHGWGGSSHYWRSTATAFSESFHCLIYDLR
CCHHHCCCCHHHHEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCEEEEEEEC
GFGRSELPVDYSGDYALDDYALDLEVLLRQLDINGKMILNAHSMGASIGAIFAAQFPQRL
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEHHHCCHHHHHHHHHHHHHH
DRAILNCNGIFEYDARAFGTFQKIAGTIVRLRFPWLRQVPGLDRLAIARFLQQPIAPTER
HHHHHCCCCEEEECHHHHHHHHHHHHHHHHEECCHHHHCCCCHHHHHHHHHHCCCCCHHH
RQFLEDFLSADNRAAAGTLLASVNEMMVTRLPQAFRNIQCPTLFLAGEKDQIIPAAMAKR
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHCC
AIALNPNFQYIEIPQVGHFPMLENPHLYQAEIQQFLRDKIPG
EEEECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]