| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is 170078102
Identifier: 170078102
GI number: 170078102
Start: 1575037
End: 1576023
Strand: Reverse
Name: 170078102
Synonym: SYNPCC7002_A1493
Alternate gene names: NA
Gene position: 1576023-1575037 (Counterclockwise)
Preceding gene: 170078104
Following gene: 170078101
Centisome position: 52.39
GC content: 54.81
Gene sequence:
>987_bases ATGAACGAACTGCGCACAACTTCCTTGGATTCCCTAGAATCTGATTCTTGGTCTGCTGAAGCAGAGGCTAACCGTCTCAT GGATGATGTGTTTGCGGATATCGATCAGCTCTTAGGCGATCGCCAGCCGCCCCAATCTTTTAGGCGATCGCCAGAACCGG AAGTCAGACCGATGCAATCAGTCTTAGTCACCCAGGGAGATCTCATGGGGCCTCCGCCAGAGGAACCCCCTTTTCCACCA GAGGAGATCGACGCAGAACTGGTGGTCAAACGGGGCTGGGGCTATTACACAGAGCGACTTCTATTTATCTGCTCCTGTGC TTCTTTGGTGGGCGGTATTCTGTGGTTAGCGGCGAATGATCAGTTAAAAATGCCGCAATTCCTCAGTCGTTCTACCCCTC CGGCGACGGAGACAGTCCCCCCAGAAAACCCAGAGCCGGGAACAGAATTTGCGAACTATATTCAGCGAGCGCTCGACAAT ATTGACCGCCAAGCGGATACAGAAGCACCAGCATCAGAGGCGAATTCCGGGCCACAGGTCATTGAACGCATTTATATTCC GGTCTATCCACCGAATGCGGGCACCAATGGCAGCGCAAACTTATCCCAAGGTCTGGCTCTCTTACCACCACCGCCAAGTG TTGAACCTCCCGTGGCGATCGCCCCCCCACCGCCACCAAAGCAAAATTCAGCTCCCTTGGCGATCGTGCCACCCCCTGCA CCCCGTGCGGTGACCCCAACCGTCAACGATGTACCTGCGCCCCCCGCAGCGCCAAAGACGATGTATAGCCTCGTGGGGGT TTTAGAAGCGGGCGATCGCTCCGAAGCTTTATTCAAAATCAATGGCACCACCCAACGGTTCCGTCTCGGTGAAGAGTTGG GCAGTGGCAGTTGGAAGTTGATTGGTGCCCAAAGCAACCAAGTCATCCTAGAGCGAGCAGGCCAAACGCGCACTGTTTAT GTTGGTCAAGACTTCCCCAGCAATTAA
Upstream 100 bases:
>100_bases CTCGACGCTGCACCATGGGCTGATCGCTAATTTCGGCACGGTTAGGTGGCGAGATCCTGATTACAATTAAAAGCAATTTT TCTGCCCCCCTCTTGGTGAT
Downstream 100 bases:
>100_bases ACTGCTAAAGGACGTTTTTAAGTTTTTGAGGCAGAGATTGTGTTGGCGTTTGGGAATCAACAGCCGATTCGGTTCGGCAC AGACGGTTGGCGTGGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY VGQDFPSN
Sequences:
>Translated_328_residues MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY VGQDFPSN >Mature_328_residues MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQSVLVTQGDLMGPPPEEPPFPP EEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAANDQLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDN IDRQADTEAPASEANSGPQVIERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKLIGAQSNQVILERAGQTRTVY VGQDFPSN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35388; Mature: 35388
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQS CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH VLVTQGDLMGPPPEEPPFPPEEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAAND HHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCC QLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDNIDRQADTEAPASEANSGPQV CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH IERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA HHEEEEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCC PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEE IGAQSNQVILERAGQTRTVYVGQDFPSN EECCCCEEHEECCCCEEEEEECCCCCCC >Mature Secondary Structure MNELRTTSLDSLESDSWSAEAEANRLMDDVFADIDQLLGDRQPPQSFRRSPEPEVRPMQS CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHHH VLVTQGDLMGPPPEEPPFPPEEIDAELVVKRGWGYYTERLLFICSCASLVGGILWLAAND HHHHCCCCCCCCCCCCCCCHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCC QLKMPQFLSRSTPPATETVPPENPEPGTEFANYIQRALDNIDRQADTEAPASEANSGPQV CCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHH IERIYIPVYPPNAGTNGSANLSQGLALLPPPPSVEPPVAIAPPPPPKQNSAPLAIVPPPA HHEEEEEEECCCCCCCCCCHHHCCEEECCCCCCCCCCEEECCCCCCCCCCCCEEEECCCC PRAVTPTVNDVPAPPAAPKTMYSLVGVLEAGDRSEALFKINGTTQRFRLGEELGSGSWKL CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEE IGAQSNQVILERAGQTRTVYVGQDFPSN EECCCCEEHEECCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA