| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078085
Identifier: 170078085
GI number: 170078085
Start: 1554767
End: 1554976
Strand: Direct
Name: 170078085
Synonym: SYNPCC7002_A1476
Alternate gene names: NA
Gene position: 1554767-1554976 (Clockwise)
Preceding gene: 170078084
Following gene: 170078086
Centisome position: 51.69
GC content: 48.1
Gene sequence:
>210_bases ATGGCTACTGGTTATACTTCCAACGAATTCGGTCAACTCAACAGCTTTGCAATCGAGCCTGAAGTCTACGTTGATACAGA ACATACCGCCGGCTGGACAGCCTACGCCGAAAAGTTAAATGGCCGCCTGGCAATGATTGGTTTTGTGGCGCTCATCGCAA CGGAATTGATTGGTGGCGATACCCTGATCAATCTCTTGTTCCAACTCTAA
Upstream 100 bases:
>100_bases ATGGCTCACACCCCAGAAAAATATTTTTTCGTCAATAACTTGCAATATTTGTTTACATTTTGTTATATTTATTCATGTAA GCAAGCACGAGGTTCCCTCA
Downstream 100 bases:
>100_bases TTTTTTAGTTTTTTCCCAGTTATTTGTCGTTTTACGAGGCTAGTTGCAATGTTTGGTTCCCTGGTTATCTTGATTCGCAA AGTCATGGGTACAGCCCGTT
Product: high light inducible protein
Products: NA
Alternate protein names: CAB/ELIP/HLIP Superfamily Protein; High Light Inducible Protein; High Light-Inducible Protein
Number of amino acids: Translated: 69; Mature: 68
Protein sequence:
>69_residues MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL
Sequences:
>Translated_69_residues MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL >Mature_68_residues ATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGDTLINLLFQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7513; Mature: 7381
Theoretical pI: Translated: 3.90; Mature: 3.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGD CCCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCH TLINLLFQL HHHHHHHCC >Mature Secondary Structure ATGYTSNEFGQLNSFAIEPEVYVDTEHTAGWTAYAEKLNGRLAMIGFVALIATELIGGD CCCCCCCCCCCCCCEEECCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCH TLINLLFQL HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA