| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170078075
Identifier: 170078075
GI number: 170078075
Start: 1541486
End: 1542055
Strand: Reverse
Name: 170078075
Synonym: SYNPCC7002_A1466
Alternate gene names: NA
Gene position: 1542055-1541486 (Counterclockwise)
Preceding gene: 170078076
Following gene: 170078073
Centisome position: 51.26
GC content: 44.74
Gene sequence:
>570_bases ATGACAATCACCACAGTACAATCTCAACAATATTCTTTGCCTGAGTTTTTGGCATTACCCGAAACCAAACCAGCAAGTGA ATATATCAACGGGAAAATTCATCAAAAACCCATGCCCCAAGGAAAGCACAGCACATTACAAGGTCGTTTAGTGGCGGAAA TTAATCGCGTTGGACAGTCTGAAAAATTAGCCTATGCTTTTCCTGAATTGCGCTGTACCTTCGGCGATCGCTCCCTTGTA CCTGATATTGCGGTGTTCGAGTGGGCCAATATTCCTGTAGACGAAAATGGCGAAATCCAAAATCGGTTTTCTGTTGCCCC AGATTGGGTAATTGAAATTCTCTCTCCAGAACAAAATCCACCCAGAGTCATCGAAAAAATTCTTTTTTCTCTGCAACAAG GGACAAAACTTGGTTGGCTCATTGCCCCAGAGGACTACTCAGTCACCATTTTTTACCCTGATAAACTCGCTGAATTCAAA GAACAAGACGATCCGCTTCCCGTTTTGCCAGCGATCGCCCCTTGGCAACTCACCGCCACAGAATTATTTGCCTGGTTACG CCTCGTCTGA
Upstream 100 bases:
>100_bases TTATTGAGTAAATTCATGACGTTTTGGAGCTATTACTGCTGCGATGGCTTTTCAATAATGGTGAAAATAATATTTTGTTA CGTAAATAGGAGAAATTGCA
Downstream 100 bases:
>100_bases AGCCTAGTGCGACAAATTATTTTTTCAAATTGGGGAGATCGCCTGTTAACAGAAAATCATGGCCGATGGATTGAAGTTGA ACATTTTCGAGGGTGATCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLV PDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFK EQDDPLPVLPAIAPWQLTATELFAWLRLV
Sequences:
>Translated_189_residues MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLV PDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFK EQDDPLPVLPAIAPWQLTATELFAWLRLV >Mature_188_residues TITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQSEKLAYAFPELRCTFGDRSLVP DIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNPPRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKE QDDPLPVLPAIAPWQLTATELFAWLRLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21432; Mature: 21301
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQS CEEEECCCCCCCCCHHHCCCCCCCHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC EKLAYAFPELRCTFGDRSLVPDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNP CCEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHEEECCCCCC PRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKEQDDPLPVLPAIAPWQLTAT HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCEECHH ELFAWLRLV HHHHHHHCC >Mature Secondary Structure TITTVQSQQYSLPEFLALPETKPASEYINGKIHQKPMPQGKHSTLQGRLVAEINRVGQS EEEECCCCCCCCCHHHCCCCCCCHHHHHCCEECCCCCCCCCCCCHHHHHHHHHHHCCCC EKLAYAFPELRCTFGDRSLVPDIAVFEWANIPVDENGEIQNRFSVAPDWVIEILSPEQNP CCEEEECCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCEECCCHHHHHEEECCCCCC PRVIEKILFSLQQGTKLGWLIAPEDYSVTIFYPDKLAEFKEQDDPLPVLPAIAPWQLTAT HHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCEECHH ELFAWLRLV HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA