Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077956

Identifier: 170077956

GI number: 170077956

Start: 1395131

End: 1395724

Strand: Direct

Name: 170077956

Synonym: SYNPCC7002_A1342

Alternate gene names: NA

Gene position: 1395131-1395724 (Clockwise)

Preceding gene: 170077955

Following gene: 170077957

Centisome position: 46.38

GC content: 53.54

Gene sequence:

>594_bases
ATGGTCTACAGCACCCAAGATTTAATTGAAATCCTCAACCAAGAGTTAAAGGCAACCCTCCGGGGCGATCGCCTTTTGCT
CTCCCCCGATGCGCGGGTGGGGGTACCGATTGTGACCATGGCCCTGGATCAAGACCAACTGGGAAAAGTGTTTGCCTGTC
AGGACTTTACCCAACAGATTCATCAATACCAACGGGAAAATCATGTTTCCGGCATCGTTTGGCGGGAAATCACCGTCGGC
GATCGCCAACTGCGCCTGCCGGAAATTCATCAGCAACTCATTGCCATCGACAGCGACAAAGCGATTCTCCGGGCAGCCAA
ACAAAATGTCCTCGACTTTTGGCACCACATCACCACTGGTTTAAACCTCTGGCAGTTAGTCGATCATCAACTTTCTCCCT
TGACTTTTACGGAGCTAGAGCGGGCCAGTCGACTCGCTGAATGGGCGGAATTAGACGTGGGCCATGGTGAATTTTACCTC
GCCCTCTGCTGGGGCAACCCGAAGGAATGTCACTATCGCTGGGCCGCCCCCAAATCTGGGTGCGATCGCCTCATTGCCGC
CGCCGAACAACCCCAACATCTCAACATCTTCTAG

Upstream 100 bases:

>100_bases
AACCGCTGACCCAGGTGAATGTGGTCTTTCAACCCAACGGCGTGATCGAAGTGAGTCCCTGGGCAGGTTATCGTTAGAAG
AAAGCGACCACCTGAAAGCC

Downstream 100 bases:

>100_bases
CTCCCAAACATTTTTTCTGATCCCTCGCCCCTGCGCTAAAATTGTGAAATAGACGTACTAATTTCTTCCCGCTTCATTGA
GTCTTTTTATGGCGATCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MVYSTQDLIEILNQELKATLRGDRLLLSPDARVGVPIVTMALDQDQLGKVFACQDFTQQIHQYQRENHVSGIVWREITVG
DRQLRLPEIHQQLIAIDSDKAILRAAKQNVLDFWHHITTGLNLWQLVDHQLSPLTFTELERASRLAEWAELDVGHGEFYL
ALCWGNPKECHYRWAAPKSGCDRLIAAAEQPQHLNIF

Sequences:

>Translated_197_residues
MVYSTQDLIEILNQELKATLRGDRLLLSPDARVGVPIVTMALDQDQLGKVFACQDFTQQIHQYQRENHVSGIVWREITVG
DRQLRLPEIHQQLIAIDSDKAILRAAKQNVLDFWHHITTGLNLWQLVDHQLSPLTFTELERASRLAEWAELDVGHGEFYL
ALCWGNPKECHYRWAAPKSGCDRLIAAAEQPQHLNIF
>Mature_197_residues
MVYSTQDLIEILNQELKATLRGDRLLLSPDARVGVPIVTMALDQDQLGKVFACQDFTQQIHQYQRENHVSGIVWREITVG
DRQLRLPEIHQQLIAIDSDKAILRAAKQNVLDFWHHITTGLNLWQLVDHQLSPLTFTELERASRLAEWAELDVGHGEFYL
ALCWGNPKECHYRWAAPKSGCDRLIAAAEQPQHLNIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22614; Mature: 22614

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYSTQDLIEILNQELKATLRGDRLLLSPDARVGVPIVTMALDQDQLGKVFACQDFTQQI
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECHHHHCCEEHHHHHHHHH
HQYQRENHVSGIVWREITVGDRQLRLPEIHQQLIAIDSDKAILRAAKQNVLDFWHHITTG
HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
LNLWQLVDHQLSPLTFTELERASRLAEWAELDVGHGEFYLALCWGNPKECHYRWAAPKSG
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCH
CDRLIAAAEQPQHLNIF
HHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MVYSTQDLIEILNQELKATLRGDRLLLSPDARVGVPIVTMALDQDQLGKVFACQDFTQQI
CCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECHHHHCCEEHHHHHHHHH
HQYQRENHVSGIVWREITVGDRQLRLPEIHQQLIAIDSDKAILRAAKQNVLDFWHHITTG
HHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
LNLWQLVDHQLSPLTFTELERASRLAEWAELDVGHGEFYLALCWGNPKECHYRWAAPKSG
CHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCCCH
CDRLIAAAEQPQHLNIF
HHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA