Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077955

Identifier: 170077955

GI number: 170077955

Start: 1393767

End: 1395107

Strand: Direct

Name: 170077955

Synonym: SYNPCC7002_A1341

Alternate gene names: NA

Gene position: 1393767-1395107 (Clockwise)

Preceding gene: 170077954

Following gene: 170077956

Centisome position: 46.33

GC content: 54.14

Gene sequence:

>1341_bases
ATGAATATTCGTCGCCAATACAACCTCCCCAACTGCACCCTCACCCTCGAAGGATTCGATGATGGGAGCGGCAAACTCCT
CGACACCCTGACCATCCTTTCCAATGTGGAATGTCGTTTTACTACCTCCCAGAAAGTGCTCAGTGGCGGGAAAATTTTCT
TTGATCACCTCGTCCAAGCCGTGAGTGAATATGCCCAGGGTATTTTAAGCGGTCTCCAACGCCCCCCCGAAATCCTCGAT
GCAAAAGGCCAAGTTCGCTTAGAAACAGCCACGGCAACCTATACCCATCATCTCCATTGGCAACAACCCGATGGCAGTGC
CGCCGAAACCCTCGAACTAACCACGGCGGAGTTGTTTGATTTAACCGAAGCCATTGATCAATTCCTGGCCGATGGTTTGA
CCCTCCCGGATTTTGTTTTACCCCTAACGCCCCTGAGCCGTCGCCATTGCGTACCCGAAGAATCCTTTGCGGATCGAGCA
GTGCCGCCCCTGGTTGGCGTCAGTGGGTTAGCCCTAACGGCCTTTGCATTATTCTTTGTCCCAGCACCGGAAACAACACG
CACCGACAGTGAACAAGTTAGCTCTGGGGAAGAAACGGAACAACTCGCCAGCGCAACTTTACCGGATACGGCCCTCTGGA
CGGAAGCTGATTTTAATCGTCTTGGTGAAACTTTACCCACCATTGCCACAGACCGCGATCTTCAGCTAATGCAAGCTTAT
CTCTATGGCACTTTGGACTCGGCCTGGACGGAGCGCGATACCACAGAGAATGCTTCCTATCGCTTGGCCCTGGGAACCGA
TGGTCGTCTTTTGGGGGTACAACCTTTAGCTGGTGCTGCGGTGACAACGGGAACAACGGCCTTGGGTGAGTTGGGTCATA
CTCCAGAGGTAGCGGCGATCGCCAACGAACAGGCCATGGCTCAATTTCGAGTCAATTTTGCGGGGAATGTCCTGGAAGTA
AGCCCCTGGGATGGCTTTCAAAGTTCTAGCGAATTGGATTTTGACTCCCGCGAAGTAGAAGGAGAAGCACTCCGACAATT
GATCCAACAGGTCAAAGACACCATCGCCGCTGAGTTTGACCGAGAAAATGCCACCATCCCCCAAACCCTGGCCTATACCC
TAGGGGTGACCAACGACGGGGCGATCGCCATTGTCGTCGCCGATAATAACGCTGCGAAAACAGCCCTTGATCAGACCCCC
CTCCCGGCCTTGGTCGAACCAGCGGCAGCGGGCATTGTCCCTGGCGAAACCATCTTGCCCACGGAACCGCTGACCCAGGT
GAATGTGGTCTTTCAACCCAACGGCGTGATCGAAGTGAGTCCCTGGGCAGGTTATCGTTAG

Upstream 100 bases:

>100_bases
GATCGCCCTCCTCGAAAAACTGCTGTTTTGCACAGGCACCGTTGGCACCCAACGGCTATGGGTCAGCCTCTTTGATGGAG
AAGTGAGCTAAACAATTACC

Downstream 100 bases:

>100_bases
AAGAAAGCGACCACCTGAAAGCCATGGTCTACAGCACCCAAGATTTAATTGAAATCCTCAACCAAGAGTTAAAGGCAACC
CTCCGGGGCGATCGCCTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 446; Mature: 446

Protein sequence:

>446_residues
MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD
AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA
VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY
LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV
SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP
LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR

Sequences:

>Translated_446_residues
MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD
AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA
VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY
LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV
SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP
LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR
>Mature_446_residues
MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD
AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA
VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY
LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV
SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP
LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48045; Mature: 48045

Theoretical pI: Translated: 4.03; Mature: 4.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHHHCCCHHHHHHHHHH
VSEYAQGILSGLQRPPEILDAKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFD
HHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCHHEEEHHHHHHHH
LTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRAVPPLVGVSGLALTAFALFFV
HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEE
PAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY
CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHH
LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAI
HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEECCCHHHHHCCCCCCHHHH
ANEQAMAQFRVNFAGNVLEVSPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFD
HCHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC
RENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTPLPALVEPAAAGIVPGETILP
CCCCCCCHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCHHHCHHHCCCCCCCCCCC
TEPLTQVNVVFQPNGVIEVSPWAGYR
CCCCCEEEEEECCCCEEEECCCCCCC
>Mature Secondary Structure
MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQA
CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHHHCCCHHHHHHHHHH
VSEYAQGILSGLQRPPEILDAKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFD
HHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCHHEEEHHHHHHHH
LTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRAVPPLVGVSGLALTAFALFFV
HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEE
PAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY
CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHH
LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAI
HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEECCCHHHHHCCCCCCHHHH
ANEQAMAQFRVNFAGNVLEVSPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFD
HCHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC
RENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTPLPALVEPAAAGIVPGETILP
CCCCCCCHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCHHHCHHHCCCCCCCCCCC
TEPLTQVNVVFQPNGVIEVSPWAGYR
CCCCCEEEEEECCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA