| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077955
Identifier: 170077955
GI number: 170077955
Start: 1393767
End: 1395107
Strand: Direct
Name: 170077955
Synonym: SYNPCC7002_A1341
Alternate gene names: NA
Gene position: 1393767-1395107 (Clockwise)
Preceding gene: 170077954
Following gene: 170077956
Centisome position: 46.33
GC content: 54.14
Gene sequence:
>1341_bases ATGAATATTCGTCGCCAATACAACCTCCCCAACTGCACCCTCACCCTCGAAGGATTCGATGATGGGAGCGGCAAACTCCT CGACACCCTGACCATCCTTTCCAATGTGGAATGTCGTTTTACTACCTCCCAGAAAGTGCTCAGTGGCGGGAAAATTTTCT TTGATCACCTCGTCCAAGCCGTGAGTGAATATGCCCAGGGTATTTTAAGCGGTCTCCAACGCCCCCCCGAAATCCTCGAT GCAAAAGGCCAAGTTCGCTTAGAAACAGCCACGGCAACCTATACCCATCATCTCCATTGGCAACAACCCGATGGCAGTGC CGCCGAAACCCTCGAACTAACCACGGCGGAGTTGTTTGATTTAACCGAAGCCATTGATCAATTCCTGGCCGATGGTTTGA CCCTCCCGGATTTTGTTTTACCCCTAACGCCCCTGAGCCGTCGCCATTGCGTACCCGAAGAATCCTTTGCGGATCGAGCA GTGCCGCCCCTGGTTGGCGTCAGTGGGTTAGCCCTAACGGCCTTTGCATTATTCTTTGTCCCAGCACCGGAAACAACACG CACCGACAGTGAACAAGTTAGCTCTGGGGAAGAAACGGAACAACTCGCCAGCGCAACTTTACCGGATACGGCCCTCTGGA CGGAAGCTGATTTTAATCGTCTTGGTGAAACTTTACCCACCATTGCCACAGACCGCGATCTTCAGCTAATGCAAGCTTAT CTCTATGGCACTTTGGACTCGGCCTGGACGGAGCGCGATACCACAGAGAATGCTTCCTATCGCTTGGCCCTGGGAACCGA TGGTCGTCTTTTGGGGGTACAACCTTTAGCTGGTGCTGCGGTGACAACGGGAACAACGGCCTTGGGTGAGTTGGGTCATA CTCCAGAGGTAGCGGCGATCGCCAACGAACAGGCCATGGCTCAATTTCGAGTCAATTTTGCGGGGAATGTCCTGGAAGTA AGCCCCTGGGATGGCTTTCAAAGTTCTAGCGAATTGGATTTTGACTCCCGCGAAGTAGAAGGAGAAGCACTCCGACAATT GATCCAACAGGTCAAAGACACCATCGCCGCTGAGTTTGACCGAGAAAATGCCACCATCCCCCAAACCCTGGCCTATACCC TAGGGGTGACCAACGACGGGGCGATCGCCATTGTCGTCGCCGATAATAACGCTGCGAAAACAGCCCTTGATCAGACCCCC CTCCCGGCCTTGGTCGAACCAGCGGCAGCGGGCATTGTCCCTGGCGAAACCATCTTGCCCACGGAACCGCTGACCCAGGT GAATGTGGTCTTTCAACCCAACGGCGTGATCGAAGTGAGTCCCTGGGCAGGTTATCGTTAG
Upstream 100 bases:
>100_bases GATCGCCCTCCTCGAAAAACTGCTGTTTTGCACAGGCACCGTTGGCACCCAACGGCTATGGGTCAGCCTCTTTGATGGAG AAGTGAGCTAAACAATTACC
Downstream 100 bases:
>100_bases AAGAAAGCGACCACCTGAAAGCCATGGTCTACAGCACCCAAGATTTAATTGAAATCCTCAACCAAGAGTTAAAGGCAACC CTCCGGGGCGATCGCCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR
Sequences:
>Translated_446_residues MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR >Mature_446_residues MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQAVSEYAQGILSGLQRPPEILD AKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFDLTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRA VPPLVGVSGLALTAFALFFVPAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAIANEQAMAQFRVNFAGNVLEV SPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFDRENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTP LPALVEPAAAGIVPGETILPTEPLTQVNVVFQPNGVIEVSPWAGYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48045; Mature: 48045
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQA CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHHHCCCHHHHHHHHHH VSEYAQGILSGLQRPPEILDAKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFD HHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCHHEEEHHHHHHHH LTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRAVPPLVGVSGLALTAFALFFV HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEE PAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHH LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAI HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEECCCHHHHHCCCCCCHHHH ANEQAMAQFRVNFAGNVLEVSPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFD HCHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC RENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTPLPALVEPAAAGIVPGETILP CCCCCCCHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCHHHCHHHCCCCCCCCCCC TEPLTQVNVVFQPNGVIEVSPWAGYR CCCCCEEEEEECCCCEEEECCCCCCC >Mature Secondary Structure MNIRRQYNLPNCTLTLEGFDDGSGKLLDTLTILSNVECRFTTSQKVLSGGKIFFDHLVQA CCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHHHCCCHHHHHHHHHH VSEYAQGILSGLQRPPEILDAKGQVRLETATATYTHHLHWQQPDGSAAETLELTTAELFD HHHHHHHHHHHHCCCHHHHCCCCCEEEEEEEEEEEEEEEEECCCCCCHHEEEHHHHHHHH LTEAIDQFLADGLTLPDFVLPLTPLSRRHCVPEESFADRAVPPLVGVSGLALTAFALFFV HHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHEE PAPETTRTDSEQVSSGEETEQLASATLPDTALWTEADFNRLGETLPTIATDRDLQLMQAY CCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCEECCHHHHHHHHHHCCCCCCCHHHHHHHH LYGTLDSAWTERDTTENASYRLALGTDGRLLGVQPLAGAAVTTGTTALGELGHTPEVAAI HHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEECCCHHHHHCCCCCCHHHH ANEQAMAQFRVNFAGNVLEVSPWDGFQSSSELDFDSREVEGEALRQLIQQVKDTIAAEFD HCHHHHHHEEEEECCCEEEECCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHC RENATIPQTLAYTLGVTNDGAIAIVVADNNAAKTALDQTPLPALVEPAAAGIVPGETILP CCCCCCCHHHEEEEECCCCCEEEEEEECCCCHHHHHCCCCCCHHHCHHHCCCCCCCCCCC TEPLTQVNVVFQPNGVIEVSPWAGYR CCCCCEEEEEECCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA