Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077954

Identifier: 170077954

GI number: 170077954

Start: 1393122

End: 1393757

Strand: Direct

Name: 170077954

Synonym: SYNPCC7002_A1340

Alternate gene names: NA

Gene position: 1393122-1393757 (Clockwise)

Preceding gene: 170077953

Following gene: 170077955

Centisome position: 46.31

GC content: 54.09

Gene sequence:

>636_bases
ATGAATGATTCTGTGAGCGTAATGCCCAATCCTAGTTCCCCATCGGTATCCCCAGGACAACCCTACCTGTTGCAAAATCT
GCCGGATCTGTTGCCGGAGGGAAAAGTGTTCCCGCGCCGGGCACAACAGCAAATTGACCTGCTCCTCTTGGCCCTAGAAG
CGTTAGAGTTGGGCGGCTCAGAATTGATGCTGCGCTCTGCCCAAAAACTAGAATTGACAGAAATTATCCCGAATCGGGTC
GTCCTCTGGCGATTACGGCGCACCAACCCCTGGCGACGTTCCCACACCCACGGCCACCTGACCCCCACAGAAGCAAAGGC
GTTGGTATTGATCATTGGCGATCGCGCCAAGAATTTACTGGCTTTATTGCGACAACTTTTACCCGCCGCCCAGCACCTCC
GGGAACGCAATCTCCCCTTAGATAGTCATTTTCGCCTTTCGGAATACCTAGAGCGGTTTCGGGCCCACTTCCGGAGTCGG
ATGAATCCCCGGCGCGTCCGTGTCACCCTCTACAACCAGTCAAAACAAGATTTAAATGAACTGGCGATCGCCCTCCTCGA
AAAACTGCTGTTTTGCACAGGCACCGTTGGCACCCAACGGCTATGGGTCAGCCTCTTTGATGGAGAAGTGAGCTAA

Upstream 100 bases:

>100_bases
CGCGTATGATCGGGTTTGAGCCTCATTGATGGCCTGGCGATAGATAGCAATCATCTCCCGTCGTGGGTTTGCAGCGAACC
AAGCTTGTTTTTCTGAGAGT

Downstream 100 bases:

>100_bases
ACAATTACCATGAATATTCGTCGCCAATACAACCTCCCCAACTGCACCCTCACCCTCGAAGGATTCGATGATGGGAGCGG
CAAACTCCTCGACACCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNDSVSVMPNPSSPSVSPGQPYLLQNLPDLLPEGKVFPRRAQQQIDLLLLALEALELGGSELMLRSAQKLELTEIIPNRV
VLWRLRRTNPWRRSHTHGHLTPTEAKALVLIIGDRAKNLLALLRQLLPAAQHLRERNLPLDSHFRLSEYLERFRAHFRSR
MNPRRVRVTLYNQSKQDLNELAIALLEKLLFCTGTVGTQRLWVSLFDGEVS

Sequences:

>Translated_211_residues
MNDSVSVMPNPSSPSVSPGQPYLLQNLPDLLPEGKVFPRRAQQQIDLLLLALEALELGGSELMLRSAQKLELTEIIPNRV
VLWRLRRTNPWRRSHTHGHLTPTEAKALVLIIGDRAKNLLALLRQLLPAAQHLRERNLPLDSHFRLSEYLERFRAHFRSR
MNPRRVRVTLYNQSKQDLNELAIALLEKLLFCTGTVGTQRLWVSLFDGEVS
>Mature_211_residues
MNDSVSVMPNPSSPSVSPGQPYLLQNLPDLLPEGKVFPRRAQQQIDLLLLALEALELGGSELMLRSAQKLELTEIIPNRV
VLWRLRRTNPWRRSHTHGHLTPTEAKALVLIIGDRAKNLLALLRQLLPAAQHLRERNLPLDSHFRLSEYLERFRAHFRSR
MNPRRVRVTLYNQSKQDLNELAIALLEKLLFCTGTVGTQRLWVSLFDGEVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24162; Mature: 24162

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDSVSVMPNPSSPSVSPGQPYLLQNLPDLLPEGKVFPRRAQQQIDLLLLALEALELGGS
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ELMLRSAQKLELTEIIPNRVVLWRLRRTNPWRRSHTHGHLTPTEAKALVLIIGDRAKNLL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHH
ALLRQLLPAAQHLRERNLPLDSHFRLSEYLERFRAHFRSRMNPRRVRVTLYNQSKQDLNE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
LAIALLEKLLFCTGTVGTQRLWVSLFDGEVS
HHHHHHHHHHHHCCCCCHHHHHEEECCCCCC
>Mature Secondary Structure
MNDSVSVMPNPSSPSVSPGQPYLLQNLPDLLPEGKVFPRRAQQQIDLLLLALEALELGGS
CCCCCEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
ELMLRSAQKLELTEIIPNRVVLWRLRRTNPWRRSHTHGHLTPTEAKALVLIIGDRAKNLL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHH
ALLRQLLPAAQHLRERNLPLDSHFRLSEYLERFRAHFRSRMNPRRVRVTLYNQSKQDLNE
HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHH
LAIALLEKLLFCTGTVGTQRLWVSLFDGEVS
HHHHHHHHHHHHCCCCCHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA