| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077953
Identifier: 170077953
GI number: 170077953
Start: 1392621
End: 1392923
Strand: Direct
Name: 170077953
Synonym: SYNPCC7002_A1339
Alternate gene names: NA
Gene position: 1392621-1392923 (Clockwise)
Preceding gene: 170077952
Following gene: 170077954
Centisome position: 46.3
GC content: 51.82
Gene sequence:
>303_bases ATGTCAGATTTGATTAAACAGCTCCAGTCCAGTTTTGGCGACAGTGAGTGGCATGACCTCGCGCCCCATGCGGCCCGTGA TGCGCTGATTGTGGTACATCCTTCCTTAGATCTGTTACAGGTGGGAGAGGCGATCGCCACGGATAATGCTCCCCTGGTGG GCAAGTGGATGAGCGGTGGCCTAGTGCGTAAGCCCACAAAAGAAGAACTAGAACGTTGGAACCAAGCAACCCAGACCCTC GTATTTGCGACATTAATTGTGCAGCCCTTTGTGCTGATCAGTGGAGATCAACCAGAAGTTTAA
Upstream 100 bases:
>100_bases ACAGTCTCCCCAAATCTTTTTTTGGTGGCCCTGGATAATTGTCAAAAAGCTGAAAATCCAGTAAACCTTAACCGTTGCCC TTAAACCTCATTATTTTTTG
Downstream 100 bases:
>100_bases AGGGGCGATCGCCCGGAATTTTTTCGCTGGGACGACCGGTCTTGTGGGGTAAACTGATTGAGAATAATCCATTGCCCTGG TGTGAGACCTCTGATCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSDLIKQLQSSFGDSEWHDLAPHAARDALIVVHPSLDLLQVGEAIATDNAPLVGKWMSGGLVRKPTKEELERWNQATQTL VFATLIVQPFVLISGDQPEV
Sequences:
>Translated_100_residues MSDLIKQLQSSFGDSEWHDLAPHAARDALIVVHPSLDLLQVGEAIATDNAPLVGKWMSGGLVRKPTKEELERWNQATQTL VFATLIVQPFVLISGDQPEV >Mature_99_residues SDLIKQLQSSFGDSEWHDLAPHAARDALIVVHPSLDLLQVGEAIATDNAPLVGKWMSGGLVRKPTKEELERWNQATQTLV FATLIVQPFVLISGDQPEV
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10988; Mature: 10856
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLIKQLQSSFGDSEWHDLAPHAARDALIVVHPSLDLLQVGEAIATDNAPLVGKWMSGG CHHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEHHCCCC LVRKPTKEELERWNQATQTLVFATLIVQPFVLISGDQPEV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure SDLIKQLQSSFGDSEWHDLAPHAARDALIVVHPSLDLLQVGEAIATDNAPLVGKWMSGG HHHHHHHHHHCCCCCCHHCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCCEEHHCCCC LVRKPTKEELERWNQATQTLVFATLIVQPFVLISGDQPEV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA