Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is 170077918

Identifier: 170077918

GI number: 170077918

Start: 1356350

End: 1356901

Strand: Direct

Name: 170077918

Synonym: SYNPCC7002_A1303

Alternate gene names: NA

Gene position: 1356350-1356901 (Clockwise)

Preceding gene: 170077917

Following gene: 170077919

Centisome position: 45.09

GC content: 50.72

Gene sequence:

>552_bases
ATGCGCCAAAATCGATGGAAAAAGGCGATCGCCAGTTTGTTGATCGTGATCAGTTGTACGTTGGCTGCTTGCGGTGGCGT
CGGTAGCCTCCAGGGCTATAGCAATGGCACCTATGGCTATCAGTTTCTCTATCCCAATGGTTGGATTCCCGTTGACGTCA
GCAAGAGCGATACTGGCGTAGATGTGGTATTTCGGGATTTGGTGGAATATTCCGAAAATTTGAGCGTCATTATCAGTGAT
GTTCCCGCCGACAAAGCCTTAAACGATCTCGGCACTCCCACCGATGTTGGCTATCGGTTTATGAAAGAAGCAAGCCAAAA
TAGCGATCGCCAACCTGAATTGATCCGGGCCGAAAGCCGCACCGACAAGGGCCAAACCTACTACACCCTCGAATATCGCG
TCACCCTCCCTGAAGGTCAAATGCGCCATGACCTCGCCACCGTTGCCGTCAAGCTAGGCAAACTCTATACCTTTAATCTC
TCGACCCGCGAAAGCCGTTGGCCCCAAGTGGAGAAACTCTTTAACGCGATGGTCAATTCCTTTAAGGTCTAA

Upstream 100 bases:

>100_bases
ATTTCGGTTTGAGCCGGTGTTTTCGCTAGGATGATGAACGCGGAGACTCCGGCTCTGTAAGTTTATTTTTTAATTTCTTT
TAAATTTCTGAGGTAAATAA

Downstream 100 bases:

>100_bases
TTGATCAGCCATATTCAAGCAATATTTTTGACACCTTGATCCGCCAGTGCATCCACCTGGGTATGCTGTAATTGCCTTTG
TTTGCGCCGCCTTACCTCAA

Product: PsbP

Products: NA

Alternate protein names: Photosystem II Oxygen-Evolving Complex; Photosystem II PsbP Protein; Photosystem II Oxygen Evolution Complex Protein PsbP

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD
VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL
STRESRWPQVEKLFNAMVNSFKV

Sequences:

>Translated_183_residues
MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD
VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL
STRESRWPQVEKLFNAMVNSFKV
>Mature_183_residues
MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGVDVVFRDLVEYSENLSVIISD
VPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESRTDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNL
STRESRWPQVEKLFNAMVNSFKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20564; Mature: 20564

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCH
DVVFRDLVEYSENLSVIISDVPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESR
HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHEECCCC
TDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNLSTRESRWPQVEKLFNAMVNS
CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH
FKV
CCC
>Mature Secondary Structure
MRQNRWKKAIASLLIVISCTLAACGGVGSLQGYSNGTYGYQFLYPNGWIPVDVSKSDTGV
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCH
DVVFRDLVEYSENLSVIISDVPADKALNDLGTPTDVGYRFMKEASQNSDRQPELIRAESR
HHHHHHHHHHCCCCEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHEECCCC
TDKGQTYYTLEYRVTLPEGQMRHDLATVAVKLGKLYTFNLSTRESRWPQVEKLFNAMVNS
CCCCCEEEEEEEEEECCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHH
FKV
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA