| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077899
Identifier: 170077899
GI number: 170077899
Start: 1334149
End: 1334589
Strand: Direct
Name: 170077899
Synonym: SYNPCC7002_A1284
Alternate gene names: NA
Gene position: 1334149-1334589 (Clockwise)
Preceding gene: 170077896
Following gene: 170077900
Centisome position: 44.35
GC content: 50.57
Gene sequence:
>441_bases ATGGCTTACGCTTATCGACGAACCATCCATTTGGCGGATACTGATGCCGCCGGGGTGGTCTACTTTGCCCAGCTTCTCCA TATTTGCCACGAGGCCTATGAAATATGTCTCATAGGGAACGGTATGGATTGGTCTGGGTTACTCCGGGAGGGAACCGTTG CCCTGCCCATTGTCCATAGTGCCATCGATTTTTTGCGGCCAATCACCTGGGGCGATCGCCTAGACATTCAGCTTTACCCA GAACTTGAAAATTCTCGCCAATTTAAGATTTCTTACCGGATTTTTAAGGAAAATCAAGACTCCCCCCCAGAATCGCCCCT GGCCACAGCCCTTACCCGCCACGTGGCGATCAATCCTAGAACTCGTCAGCGTTGTAGCCTACCTCCGGTAGTCGAAACAT GGTTAAGGAATGCACCGAAAATCGAGGACAGCAAAATTTAG
Upstream 100 bases:
>100_bases AAAGTTAAAGAGTTTACTTTGGTAGGGGCCTGGAGCAGACATCGTCATTTTTGCGGCACAACGCTTTTATTGTCCCATAG AGATTTCGGAATCGAAGTTT
Downstream 100 bases:
>100_bases CCTGTACAATTGTCTTGAATCTAACGATATCTTTTTACCTGTGATGCTAAAACAAGGTAGCTCACGCACTTAATTCATTA TTTTTCATTATTTTCAGACT
Product: thioesterase family protein
Products: NA
Alternate protein names: DHNA-CoA hydrolase; DHNA-CoA thioesterase
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYP ELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI
Sequences:
>Translated_146_residues MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYP ELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI >Mature_145_residues AYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHSAIDFLRPITWGDRLDIQLYPE LENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPRTRQRCSLPPVVETWLRNAPKIEDSKI
Specific function: Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl- CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA), a reaction involved in phylloquinone (vitamin K1) biosynthesis
COG id: COG0824
COG function: function code R; Predicted thioesterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family. DHNA-CoA hydrolase subfamily
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DNCH_SYNP2 (B1XL26)
Other databases:
- EMBL: CP000951 - RefSeq: YP_001734537.1 - ProteinModelPortal: B1XL26 - SMR: B1XL26 - GeneID: 6055567 - GenomeReviews: CP000951_GR - KEGG: syp:SYNPCC7002_A1284 - HOGENOM: HBG439376 - OMA: HEAWEES - HAMAP: MF_02101 - InterPro: IPR022829 - InterPro: IPR006683
Pfam domain/function: PF03061 4HBT
EC number: =3.1.2.28
Molecular weight: Translated: 16688; Mature: 16557
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS01328 4HBCOA_THIOESTERASE
Important sites: ACT_SITE 15-15
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHS CCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEHHHHHH AIDFLRPITWGDRLDIQLYPELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPR HHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHEEECCC TRQRCSLPPVVETWLRNAPKIEDSKI CCCCCCCCHHHHHHHCCCCCCCCCCC >Mature Secondary Structure AYAYRRTIHLADTDAAGVVYFAQLLHICHEAYEICLIGNGMDWSGLLREGTVALPIVHS CCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHCCCCEEHHHHHH AIDFLRPITWGDRLDIQLYPELENSRQFKISYRIFKENQDSPPESPLATALTRHVAINPR HHHHHHCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHEEECCC TRQRCSLPPVVETWLRNAPKIEDSKI CCCCCCCCHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA