Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is tatC [C]

Identifier: 170077841

GI number: 170077841

Start: 1269330

End: 1270091

Strand: Reverse

Name: tatC [C]

Synonym: SYNPCC7002_A1225

Alternate gene names: 170077841

Gene position: 1270091-1269330 (Counterclockwise)

Preceding gene: 170077842

Following gene: 170077839

Centisome position: 42.22

GC content: 52.1

Gene sequence:

>762_bases
ATGACCTCGACCCAAAGTAAAATGCCCCCAACCGAGTCCCCAGATCCCATGCGGGAGATTCCCGATGAAGCAGAAATGTC
CTTTTTCGATCACCTCGAAGAACTCCGCTGGCGCATTTTTTATTCGCTGATTTCCGTTGTTGTCGGTTGGGTCGGTTGTT
TCTTTTTTGTCAAACCCATCGTCCAGATCTTAGAAGCGCCTGCTGCTGGGGTGAAATTCATCCAGGTGGCCCCCGGCGAA
TTTTTCTTTCTCTCGTTTAAGGTGGCGGGCTACACCGGCGCTTTACTGGCGAGTCCTTTTATCCTGTACCAAATTATTCA
GTTTGTTTTGCCGGGGCTAACCAGGGGAGAACGGCGTCTCCTCGCTCCCGTTGTCTTGGGGTCTGGTGTGCTGTTTTTTG
CGGGCTTGGCCTTTGCCTACGTTGCTTTGATTCCAGCGGCTCTGAATTTTTTCATTACCTATGGTGCTGATGTCGTAGAG
GCGGCCTGGTCTATTGAACGGTATTTTGAGTTGGTGCTGGGTCTGATGTTTTTTACGGGGCTAGCGTTTCAGGTGCCTGT
GGTGCAAATGATCTTGTCTTGGTTGGGGATTGTTTCTTCGAGCCTGATGCTCAAGGGTTGGCGCTTTGTCGTTCTGGGGG
CAGTGGTGCTCGGCGCGGTGATTACGCCCTCGACAGATCCGATGACCCAATCACTCTTGGCTGGGGCCGTCCTGGGCTTA
TATTTTGGCGGCATTGGCATTGTGAAACTTTCAGGACGCTAG

Upstream 100 bases:

>100_bases
CGAACAATGGCTGCGGGTGCATCAACTGAAAGGGTGATCTCCCCTAACTTCCCCAAAAACCTCCGTTAAAATAAAACTCT
GCTGTGCACCTTTCTTCACC

Downstream 100 bases:

>100_bases
GGGCTTGGCGATCGCCTGCAGTACAGCGGCCATTAATTCGGGGCGACCAAAGGGTTTACGGAGAAAAGAATCGGGCTGTG
GCACAGAATATTCTGGTAAG

Product: Sec-independent protein translocase TatC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGE
FFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVE
AAWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL
YFGGIGIVKLSGR

Sequences:

>Translated_253_residues
MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGE
FFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVE
AAWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL
YFGGIGIVKLSGR
>Mature_252_residues
TSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPIVQILEAPAAGVKFIQVAPGEF
FFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRLLAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEA
AWSIERYFELVLGLMFFTGLAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGLY
FGGIGIVKLSGR

Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=228, Percent_Identity=32.4561403508772, Blast_Score=120, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 27625; Mature: 27494

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPI
CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQILEAPAAGVKFIQVAPGEFFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRL
HHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEAAWSIERYFELVLGLMFFTG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YFGGIGIVKLSGR
HHCCEEEEEECCC
>Mature Secondary Structure 
TSTQSKMPPTESPDPMREIPDEAEMSFFDHLEELRWRIFYSLISVVVGWVGCFFFVKPI
CCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQILEAPAAGVKFIQVAPGEFFFLSFKVAGYTGALLASPFILYQIIQFVLPGLTRGERRL
HHHHHCCCCCCEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
LAPVVLGSGVLFFAGLAFAYVALIPAALNFFITYGADVVEAAWSIERYFELVLGLMFFTG
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LAFQVPVVQMILSWLGIVSSSLMLKGWRFVVLGAVVLGAVITPSTDPMTQSLLAGAVLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
YFGGIGIVKLSGR
HHCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]