| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077829
Identifier: 170077829
GI number: 170077829
Start: 1256462
End: 1256833
Strand: Direct
Name: 170077829
Synonym: SYNPCC7002_A1213
Alternate gene names: NA
Gene position: 1256462-1256833 (Clockwise)
Preceding gene: 170077826
Following gene: 170077830
Centisome position: 41.77
GC content: 47.31
Gene sequence:
>372_bases ATGGACTACTCATCGACGCGCAGTTGGGATTCAGCTTACCTATCTGTACTATTAAAAAGCTTTTTGATCTGGAGTTTTAC GCTACTGGTTTGCCTTTTGGTTGTCGGTTTTCCAATCGTTGTTTTAATGATGACTATTGGTTCGCTCATGGCCATTGTGC TCCAGTCTATTTTGCCGGTTAGTGCAGTGCTCGTTGTTGCCGGGACGATTATTGGCGGCACCTTGATGGGCATTTTGGTC GCAGCGGCAATGCTAACCGCCAAGGGAGTTCACCCGCAAGAGGTGACTTGGTTAACTTGGCTCCATGGAAATGCAGAGGT CGCATCGGATTCTATTTTTGCAGCCTGCCCTTTAACCTGTGAAGTTAGTTAG
Upstream 100 bases:
>100_bases TTTATACTATTTACTATCGAAGGGCATCAACACCCAGAAATATTGATGCTTCCATTTAAGTTTTTTGACAACTAAACATA TCCCTGGGAGGGGACAGATT
Downstream 100 bases:
>100_bases AGGCACACCTGTACACTGCCTCGTTGATTAGAGTTTTCCAAAGTTCATAGTGATCTAAAAAAAGATGCTTGTATCTACCC GGTAATTTGCCGGGTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS
Sequences:
>Translated_123_residues MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS >Mature_123_residues MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPVSAVLVVAGTIIGGTLMGILV AAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTCEVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13059; Mature: 13059
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVLVVAGTIIGGTLMGILVAAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCHHHCCCCCEECCCEE EVS ECC >Mature Secondary Structure MDYSSTRSWDSAYLSVLLKSFLIWSFTLLVCLLVVGFPIVVLMMTIGSLMAIVLQSILPV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SAVLVVAGTIIGGTLMGILVAAAMLTAKGVHPQEVTWLTWLHGNAEVASDSIFAACPLTC HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHEEEEECCCCHHHCCCCCEECCCEE EVS ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA