| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
Click here to switch to the map view.
The map label for this gene is cysG/hemD [H]
Identifier: 170077809
GI number: 170077809
Start: 1236479
End: 1237969
Strand: Reverse
Name: cysG/hemD [H]
Synonym: SYNPCC7002_A1192
Alternate gene names: 170077809
Gene position: 1237969-1236479 (Counterclockwise)
Preceding gene: 170077812
Following gene: 170077804
Centisome position: 41.16
GC content: 51.71
Gene sequence:
>1491_bases ATGGGAAAAGTATTTTTGCTAGGAGCGGGTTTAGGGACAAAGAACTATTTAACGGTGCGAGGTTGGGAGATCCTCCAACG GGCGGAAGTGGTGATTTACGACGCCCTGGGTTCCCAAGAACTGTTGGATCTGCTGCCCCAGGACTGTTTACGGTTATTCG TCGGTAAGCGAGGCGGCCAAAAGAGTACGCCCCAAGAAGAAATTAATCGCCTTTTGGTTGAGCATGGACAATCGCCAAAA CGGGTGGTGCGCCTGAAGGGGGGAGATCCGTATATTTTTGGGCGATCGCACCCAGAGATTTTGGCACTCCAAGGGGCGGG CTGTGATTTTGAAGTGATTCCTGGCATTTCATCGGCCTTCGCAGCACCTTTGCTAGCGGGAATTCCCCTTACCCACAAGG ATTTGGGGCGCGGCTTTTTTGTAGGGACAGCCCATGATCTAGAGGCCTTTGATTGGACAGCCCTAGCCCAATTGGAAACT TTGGTTTTTTTGATGGGGGGACGCAATTTAGAAGACATTTGTCGGCGCTTGATGGCAGCGGGGCGATCGCCTCATTTACC AGTGGCCATTGTGCGGGCGGCGGGATTACCAGAGCAGCAGGTCTGGACGGGAACGTTACAGACCATTACGAAGCAAACGG CGACGGTTCAAAAACTTTCGCCCTGTGTGATCATTGTGGGTCAGGTAGTTAGTCTCCGGGAGGATTACATGGATCGGGCT CCATTGGGTGGCAAAACAATTCTGATTACCCGCGCTGCGTCGCAATCGAGCGAATTTACCAAACTTTTGGCAGAAACTGG CGCAAAGGTCTTGGAAATGCCCGCTTTAGAGATTCGTGAGCCCTCCACCTGGGAACCCCTCGACCAGGCGATCGCCACCC TAGAAACCTTTGATTGGCTGATTCTCACCTCGGCCAATGGCGTTGAATATTTTTTCCAGCGACTCGAAACCTTGGGCAAA GATGTCCGCGCCTTAGGCAAGCTCAAAATTGCCGTCGTCGGCAAAAAAACAGAAAAATTCTTGCGCCAGCACGGCCTCAA AGCGGACTATATTCCCCCCGATTTTATTGCAGATTCCTTAGTGGAAAATTTCCCAGATCCTCTGCAAAATCAAAAAATTC TTTTTCCCCGGGTCGAAACGGGAGGCCGAAAAATCCTGGTGCAAGAGCTCGCCCAACAGGGTGCCCAGGTGGTTGAAGTG CCCGCCTATGAATCGGGCTGTCCGCGACAAATTCCGGCGGCGGTCTGGCAAGCTCTCGAAGCACAAACCATTGATCTAGT AACCTTTGCGAGCTCTAAAACAGTGCGCAACTTTTGGCAGCTAATTCAGCAGCAGGGGGGGGATTTAGCGTTATTAAAAC CGCTGAAAATTGCCTCCATTGGCCCCCAAACTTCCCAGACTTGTTTAAACCTTTTCCAGCGGGTTGATCTCGAAGCCGAG GTCTACACCCTAGAAGGCTTACGGGATGTCATTCTGGACAATTGCGTATAG
Upstream 100 bases:
>100_bases GGTAACGTGTTGGCGTTACGGTTGCGGGGTGTTTTTGTCTGATTTTGTCTTAGCATCTAATTTTAACGCAAGGTTTGACG GTGGTTTAGGGCGATCGCAC
Downstream 100 bases:
>100_bases TTCACAATCCCGAAGAGCGGACTTGATAGGGGATTTCTTCGATGGGGAGATTGTCTAAATTCCAGTCGGCGTAATGCAAT TGGAGGCGTTTTTCGCCCGC
Product: uroporphyrin-III synthase/methyltransferase
Products: NA
Alternate protein names: Uroporphyrinogen-III C-methyltransferase; Urogen III methylase; SUMT; Uroporphyrinogen III methylase; UROM; Uroporphyrinogen-III synthase; UROS; Hydroxymethylbilane hydrolyase [cyclizing]; Uroporphyrinogen-III cosynthase [H]
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MGKVFLLGAGLGTKNYLTVRGWEILQRAEVVIYDALGSQELLDLLPQDCLRLFVGKRGGQKSTPQEEINRLLVEHGQSPK RVVRLKGGDPYIFGRSHPEILALQGAGCDFEVIPGISSAFAAPLLAGIPLTHKDLGRGFFVGTAHDLEAFDWTALAQLET LVFLMGGRNLEDICRRLMAAGRSPHLPVAIVRAAGLPEQQVWTGTLQTITKQTATVQKLSPCVIIVGQVVSLREDYMDRA PLGGKTILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWLILTSANGVEYFFQRLETLGK DVRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADSLVENFPDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEV PAYESGCPRQIPAAVWQALEAQTIDLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAE VYTLEGLRDVILDNCV
Sequences:
>Translated_496_residues MGKVFLLGAGLGTKNYLTVRGWEILQRAEVVIYDALGSQELLDLLPQDCLRLFVGKRGGQKSTPQEEINRLLVEHGQSPK RVVRLKGGDPYIFGRSHPEILALQGAGCDFEVIPGISSAFAAPLLAGIPLTHKDLGRGFFVGTAHDLEAFDWTALAQLET LVFLMGGRNLEDICRRLMAAGRSPHLPVAIVRAAGLPEQQVWTGTLQTITKQTATVQKLSPCVIIVGQVVSLREDYMDRA PLGGKTILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWLILTSANGVEYFFQRLETLGK DVRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADSLVENFPDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEV PAYESGCPRQIPAAVWQALEAQTIDLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAE VYTLEGLRDVILDNCV >Mature_495_residues GKVFLLGAGLGTKNYLTVRGWEILQRAEVVIYDALGSQELLDLLPQDCLRLFVGKRGGQKSTPQEEINRLLVEHGQSPKR VVRLKGGDPYIFGRSHPEILALQGAGCDFEVIPGISSAFAAPLLAGIPLTHKDLGRGFFVGTAHDLEAFDWTALAQLETL VFLMGGRNLEDICRRLMAAGRSPHLPVAIVRAAGLPEQQVWTGTLQTITKQTATVQKLSPCVIIVGQVVSLREDYMDRAP LGGKTILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWLILTSANGVEYFFQRLETLGKD VRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADSLVENFPDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEVP AYESGCPRQIPAAVWQALEAQTIDLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAEV YTLEGLRDVILDNCV
Specific function: May catalyze sequential reactions to synthesize uroporphyrinogen III from hydroxymethylbilane (HMB) and then precorrin-2, which are intermediate compounds in both vitamin B12 and siroheme biosyntheses [H]
COG id: COG1587
COG function: function code H; Uroporphyrinogen-III synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
Organism=Escherichia coli, GI1789768, Length=236, Percent_Identity=43.2203389830509, Blast_Score=176, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6322922, Length=233, Percent_Identity=30.4721030042918, Blast_Score=103, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR003754 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006366 - InterPro: IPR003043 [H]
Pfam domain/function: PF02602 HEM4; PF00590 TP_methylase [H]
EC number: =2.1.1.107; =4.2.1.75 [H]
Molecular weight: Translated: 54511; Mature: 54380
Theoretical pI: Translated: 6.28; Mature: 6.28
Prosite motif: PS00840 SUMT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKVFLLGAGLGTKNYLTVRGWEILQRAEVVIYDALGSQELLDLLPQDCLRLFVGKRGGQ CCEEEEEECCCCCCCEEEECHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC KSTPQEEINRLLVEHGQSPKRVVRLKGGDPYIFGRSHPEILALQGAGCDFEVIPGISSAF CCCCHHHHHHHHHHCCCCCHHEEEEECCCEEEECCCCCCEEEEECCCCCEEECCCCHHHH AAPLLAGIPLTHKDLGRGFFVGTAHDLEAFDWTALAQLETLVFLMGGRNLEDICRRLMAA HHHHHHCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GRSPHLPVAIVRAAGLPEQQVWTGTLQTITKQTATVQKLSPCVIIVGQVVSLREDYMDRA CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PLGGKTILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWL CCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCEE ILTSANGVEYFFQRLETLGKDVRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADSL EEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHH VENFPDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEVPAYESGCPRQIPAAVWQALE HHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHC AQTIDLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAE CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHCCCCEE VYTLEGLRDVILDNCV EEEHHHHHHHHHHCCC >Mature Secondary Structure GKVFLLGAGLGTKNYLTVRGWEILQRAEVVIYDALGSQELLDLLPQDCLRLFVGKRGGQ CEEEEEECCCCCCCEEEECHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCC KSTPQEEINRLLVEHGQSPKRVVRLKGGDPYIFGRSHPEILALQGAGCDFEVIPGISSAF CCCCHHHHHHHHHHCCCCCHHEEEEECCCEEEECCCCCCEEEEECCCCCEEECCCCHHHH AAPLLAGIPLTHKDLGRGFFVGTAHDLEAFDWTALAQLETLVFLMGGRNLEDICRRLMAA HHHHHHCCCCCHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHC GRSPHLPVAIVRAAGLPEQQVWTGTLQTITKQTATVQKLSPCVIIVGQVVSLREDYMDRA CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC PLGGKTILITRAASQSSEFTKLLAETGAKVLEMPALEIREPSTWEPLDQAIATLETFDWL CCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHCCCHHCCCCCCCCHHHHHHHHHHHHCEE ILTSANGVEYFFQRLETLGKDVRALGKLKIAVVGKKTEKFLRQHGLKADYIPPDFIADSL EEECCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCCCCCHHHHHHHH VENFPDPLQNQKILFPRVETGGRKILVQELAQQGAQVVEVPAYESGCPRQIPAAVWQALE HHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHC AQTIDLVTFASSKTVRNFWQLIQQQGGDLALLKPLKIASIGPQTSQTCLNLFQRVDLEAE CCCEEEEEECCCHHHHHHHHHHHHCCCCEEEECCEEEECCCCCHHHHHHHHHHHCCCCEE VYTLEGLRDVILDNCV EEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7665501 [H]