Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is plsY [H]

Identifier: 170077631

GI number: 170077631

Start: 1042257

End: 1042904

Strand: Reverse

Name: plsY [H]

Synonym: SYNPCC7002_A1010

Alternate gene names: 170077631

Gene position: 1042904-1042257 (Counterclockwise)

Preceding gene: 170077632

Following gene: 170077628

Centisome position: 34.67

GC content: 51.54

Gene sequence:

>648_bases
ATGAATCTTTCGTTGGCGATCGCCCCCTTTTGCATCGGAGTAGCCTATTTATTGGGCGCTATTCCCACGGGCTACCTAGC
TGGCAAGTGGCTCAAGGGAATTGATATCCGCGATTATGGTTCCCGTTCCACAGGGGCGACCAACGTCCTCAGAACCCTCG
GTAAAAAAGCGGGGATCACGGTGTTGCTCTTCGATGCGCTCAAGGGCGTTGCGGCGATCTTATTTTTTAAGCTGCTTTAT
ACCCACCCCGAATGGATCGCTTTTCCTGCCAACTATGACCAATACTGGCTCACCATGGCCGTGGCGATCGCCGCTGTCTT
GGGCCACAGCAAATCGATTTTCATCGGCTTTAACGGCGGCAAATCCGTTGCTACCAGCATCGGCGTCCTTTTGATTATGG
CTCCTTGGGTGGCCCTGGGCACCATCGTCACCTTTGCAGCGGCAATTACTTTAACCCAAATCGTTTCCCTGAGTTCAATC
AGTGGGGCGATCGCCGTGATGCTTTTGATGATTGTTTTACAGCAGCCCCTCCCCTACATTCTCTTTGGGGCGATCGCTGG
TATTTATGTCATTGTGCGCCATCGCAGTAATATCCAAAGAATCATCGCTGGTACCGAACCTAAAATTGGCGCAAAGGCAA
CAAACTAA

Upstream 100 bases:

>100_bases
CAATACCCGTTGTGGCTTGCATTTGCGCCGGAACCCCAGTCCGATTCTTCTTACTTTTTCTAAGTTTTCGCACGTGTTTT
CTGCATCGGAGTAATGGGTT

Downstream 100 bases:

>100_bases
ACTTTAAAATTAGTGCTCAACAGATAAAGTTTCTCCTTGAAAATAGGGAGAAGATTTTCTGTACTTTTGATTAATTTATC
CGGCCTGATTTACTTGGAAA

Product: membrane protein

Products: NA

Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY
THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI
SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN

Sequences:

>Translated_215_residues
MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY
THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI
SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN
>Mature_215_residues
MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGITVLLFDALKGVAAILFFKLLY
THPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGGKSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSI
SGAIAVMLLMIVLQQPLPYILFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN

Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP [H]

COG id: COG0344

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the plsY family [H]

Homologues:

Organism=Escherichia coli, GI1789439, Length=210, Percent_Identity=35.2380952380952, Blast_Score=94, Evalue=9e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003811 [H]

Pfam domain/function: PF02660 DUF205 [H]

EC number: NA

Molecular weight: Translated: 22808; Mature: 22808

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGIT
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
VLLFDALKGVAAILFFKLLYTHPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
KSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSISGAIAVMLLMIVLQQPLPYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNLSLAIAPFCIGVAYLLGAIPTGYLAGKWLKGIDIRDYGSRSTGATNVLRTLGKKAGIT
CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCH
VLLFDALKGVAAILFFKLLYTHPEWIAFPANYDQYWLTMAVAIAAVLGHSKSIFIGFNGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCC
KSVATSIGVLLIMAPWVALGTIVTFAAAITLTQIVSLSSISGAIAVMLLMIVLQQPLPYI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
LFGAIAGIYVIVRHRSNIQRIIAGTEPKIGAKATN
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA