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The map label for this gene is psaF [H]

Identifier: 170077629

GI number: 170077629

Start: 1041231

End: 1041740

Strand: Direct

Name: psaF [H]

Synonym: SYNPCC7002_A1008

Alternate gene names: 170077629

Gene position: 1041231-1041740 (Clockwise)

Preceding gene: 170077627

Following gene: 170077630

Centisome position: 34.61

GC content: 51.18

Gene sequence:

>510_bases
ATGCAACGTTTCGTAGCTGTTGTTTGCGCCTTTGCTCTCTCTTTAACTTTGTGGCTGGGTTTTGCTTCCCCCGTGAAAGC
AGATTCTTTGTCTCACTTAACCCCCTGTAGTGAGTCCGCCGCTTATAAACAAAGAGCAAAGAACTTCCGCAACACCACCG
CAGACCCGAACTCCGGTCAAAACCGTGCCGCTGCTTACTCTGAAGCCCTCTGTGGCCCCGAAGGTTTGCCCCACCTTATC
GTGGACGGCCGTCTTGATCATGCCGGTGAATTTTTAATTCCAAGTCTTCTCTTTCTCTACATTGCTGGTTGGATCGGCTG
GGCTGGTCGCGCTTATCTGATCGCAGTCCGTGATGAAAAAGATGCGGCAATGCAAGAAGTCATCATCAATGTCCCCCGGG
CGTTTAGTTTGATGTTGGCTGGTTTTGCTTGGCCTTTGGCTGCTCTGAAAGAATTTACTTCCGGTGAGCTAGTCGTGAAG
GATGCGGATGTCCCCATCTCTCCTCGCTAG

Upstream 100 bases:

>100_bases
GATACGCTGGTCACAGTAATATTGCTTCCAAAGTACAAATGGATTGGCGTATCTTTTGTACAAAAAACTTAATTATTTTG
TAACAAAAGGAAACAAACTT

Downstream 100 bases:

>100_bases
GTTTTCATTTTTAAGTATTTATCATTCTTTTTGGAGTAAATAAATGGATAAGTTCTTATCTTCTGCGCCGGTGTTGTTGA
CCGCAATGATGGTTTTTACG

Product: photosystem I reaction center subunit III, PsaF

Products: NA

Alternate protein names: PSI-F [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MQRFVAVVCAFALSLTLWLGFASPVKADSLSHLTPCSESAAYKQRAKNFRNTTADPNSGQNRAAAYSEALCGPEGLPHLI
VDGRLDHAGEFLIPSLLFLYIAGWIGWAGRAYLIAVRDEKDAAMQEVIINVPRAFSLMLAGFAWPLAALKEFTSGELVVK
DADVPISPR

Sequences:

>Translated_169_residues
MQRFVAVVCAFALSLTLWLGFASPVKADSLSHLTPCSESAAYKQRAKNFRNTTADPNSGQNRAAAYSEALCGPEGLPHLI
VDGRLDHAGEFLIPSLLFLYIAGWIGWAGRAYLIAVRDEKDAAMQEVIINVPRAFSLMLAGFAWPLAALKEFTSGELVVK
DADVPISPR
>Mature_169_residues
MQRFVAVVCAFALSLTLWLGFASPVKADSLSHLTPCSESAAYKQRAKNFRNTTADPNSGQNRAAAYSEALCGPEGLPHLI
VDGRLDHAGEFLIPSLLFLYIAGWIGWAGRAYLIAVRDEKDAAMQEVIINVPRAFSLMLAGFAWPLAALKEFTSGELVVK
DADVPISPR

Specific function: Probably participates in efficiency of electron transfer from plastocyanin to P700 (or cytochrome c553 in algae and cyanobacteria). This plastocyanin-docking protein contributes to the specific association of plastocyanin to PSI [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003666 [H]

Pfam domain/function: PF02507 PSI_PsaF [H]

EC number: NA

Molecular weight: Translated: 18322; Mature: 18322

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFVAVVCAFALSLTLWLGFASPVKADSLSHLTPCSESAAYKQRAKNFRNTTADPNSGQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
NRAAAYSEALCGPEGLPHLIVDGRLDHAGEFLIPSLLFLYIAGWIGWAGRAYLIAVRDEK
CHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH
DAAMQEVIINVPRAFSLMLAGFAWPLAALKEFTSGELVVKDADVPISPR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MQRFVAVVCAFALSLTLWLGFASPVKADSLSHLTPCSESAAYKQRAKNFRNTTADPNSGQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC
NRAAAYSEALCGPEGLPHLIVDGRLDHAGEFLIPSLLFLYIAGWIGWAGRAYLIAVRDEK
CHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCH
DAAMQEVIINVPRAFSLMLAGFAWPLAALKEFTSGELVVKDADVPISPR
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1939076; 8106355; 8905231; 8536689 [H]