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The map label for this gene is psaJ

Identifier: 170077630

GI number: 170077630

Start: 1041784

End: 1041897

Strand: Direct

Name: psaJ

Synonym: SYNPCC7002_A1009

Alternate gene names: 170077630

Gene position: 1041784-1041897 (Clockwise)

Preceding gene: 170077629

Following gene: 170077634

Centisome position: 34.63

GC content: 43.86

Gene sequence:

>114_bases
ATGGATAAGTTCTTATCTTCTGCGCCGGTGTTGTTGACCGCAATGATGGTTTTTACGGCCGGACTATTAATTGAGTTCAA
CCGTTTCTTCCCTGATCTTTTATTCCACCCGTAG

Upstream 100 bases:

>100_bases
TTTACTTCCGGTGAGCTAGTCGTGAAGGATGCGGATGTCCCCATCTCTCCTCGCTAGGTTTTCATTTTTAAGTATTTATC
ATTCTTTTTGGAGTAAATAA

Downstream 100 bases:

>100_bases
GTTCAAATAAAACATCACTGGGATTTTGGTTTTAATAATCTAATAAAACAACAGCACTGGGAATAGTCTCAGTGCTTTTT
TAATTGGTTCGACTTGATTT

Product: photosystem I reaction centre, subunit IX / PsaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 37; Mature: 37

Protein sequence:

>37_residues
MDKFLSSAPVLLTAMMVFTAGLLIEFNRFFPDLLFHP

Sequences:

>Translated_37_residues
MDKFLSSAPVLLTAMMVFTAGLLIEFNRFFPDLLFHP
>Mature_37_residues
MDKFLSSAPVLLTAMMVFTAGLLIEFNRFFPDLLFHP

Specific function: May help in the organization of the psaE and psaF subunits

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psaJ family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSAJ_SYNP2 (B1XJF2)

Other databases:

- EMBL:   CP000951
- RefSeq:   YP_001734268.1
- ProteinModelPortal:   B1XJF2
- SMR:   B1XJF2
- GeneID:   6057431
- GenomeReviews:   CP000951_GR
- KEGG:   syp:SYNPCC7002_A1009
- HOGENOM:   HBG440999
- GO:   GO:0015979
- HAMAP:   MF_00522
- InterPro:   IPR002615
- ProDom:   PD004198

Pfam domain/function: PF01701 PSI_PsaJ; SSF81544 PSI_PsaJ

EC number: NA

Molecular weight: Translated: 4231; Mature: 4231

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1aac1f9c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.1 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.1 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKFLSSAPVLLTAMMVFTAGLLIEFNRFFPDLLFHP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure
MDKFLSSAPVLLTAMMVFTAGLLIEFNRFFPDLLFHP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA