Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

Click here to switch to the map view.

The map label for this gene is 170077587

Identifier: 170077587

GI number: 170077587

Start: 995319

End: 995774

Strand: Direct

Name: 170077587

Synonym: SYNPCC7002_A0966

Alternate gene names: NA

Gene position: 995319-995774 (Clockwise)

Preceding gene: 170077585

Following gene: 170077588

Centisome position: 33.09

GC content: 37.06

Gene sequence:

>456_bases
ATGGTGAATGCGAAATCTCAAATATCCATGCAAGTTTTATATGACCAGGATTTTAATCTTTGGCTTGCGGAAACAGTGCG
TTTTCTCAAGGAAGGAAAATTATTGGAGGTTGACTATGGAAATTTGATTGAGGAACTAGAAACCATGGGCCAGAGCGAAA
AAAATGCTCTCAAAAGCAATCTAAAAATACTCCTGATGCATCTTCTCAAATATCAGTTTCAGCCCGAAAAAAGAACCAAT
AGTTGGCGTTATACAATTACGGAACACCGCCAAAGAATTTTAGACAGTTTAGAAATCAGTCCGAGTTTAAAAGGATTTTT
TGAACAAGAATTTGAACGTTGTTATCAAAATGCCCGCCGTTTAGCTGCTGATGAAACAGGAATTTCTATTGGCAATTTTC
CCAAGATCTCACCCTTTACAATCTCAGAAAGTCTTGACTTAGATTATTTGCCCTGA

Upstream 100 bases:

>100_bases
GGCGACAATAAAAAATCAAAGCTAGATTAGAGTTCCTATGGCGCTACGTTTTTGATAAATATCAAATATTATTCTTTGAT
TAAGTATCGTGGTTTAAATA

Downstream 100 bases:

>100_bases
TTTTTGAGTTGCTATATTCTCAGCGCTGAGCAGTGGGCGATCGCTCCAGAAGACATCGACTACACTAAAAATATCAATAC
TCCCAGGAAAACCATGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MVNAKSQISMQVLYDQDFNLWLAETVRFLKEGKLLEVDYGNLIEELETMGQSEKNALKSNLKILLMHLLKYQFQPEKRTN
SWRYTITEHRQRILDSLEISPSLKGFFEQEFERCYQNARRLAADETGISIGNFPKISPFTISESLDLDYLP

Sequences:

>Translated_151_residues
MVNAKSQISMQVLYDQDFNLWLAETVRFLKEGKLLEVDYGNLIEELETMGQSEKNALKSNLKILLMHLLKYQFQPEKRTN
SWRYTITEHRQRILDSLEISPSLKGFFEQEFERCYQNARRLAADETGISIGNFPKISPFTISESLDLDYLP
>Mature_151_residues
MVNAKSQISMQVLYDQDFNLWLAETVRFLKEGKLLEVDYGNLIEELETMGQSEKNALKSNLKILLMHLLKYQFQPEKRTN
SWRYTITEHRQRILDSLEISPSLKGFFEQEFERCYQNARRLAADETGISIGNFPKISPFTISESLDLDYLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17700; Mature: 17700

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNAKSQISMQVLYDQDFNLWLAETVRFLKEGKLLEVDYGNLIEELETMGQSEKNALKSN
CCCCCHHEEEEEEECCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHH
LKILLMHLLKYQFQPEKRTNSWRYTITEHRQRILDSLEISPSLKGFFEQEFERCYQNARR
HHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAADETGISIGNFPKISPFTISESLDLDYLP
HHCCCCCCCCCCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MVNAKSQISMQVLYDQDFNLWLAETVRFLKEGKLLEVDYGNLIEELETMGQSEKNALKSN
CCCCCHHEEEEEEECCCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHHHCCCHHHHHHHH
LKILLMHLLKYQFQPEKRTNSWRYTITEHRQRILDSLEISPSLKGFFEQEFERCYQNARR
HHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LAADETGISIGNFPKISPFTISESLDLDYLP
HHCCCCCCCCCCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA