| Definition | Synechococcus sp. PCC 7002 chromosome, complete genome. |
|---|---|
| Accession | NC_010475 |
| Length | 3,008,047 |
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The map label for this gene is 170077588
Identifier: 170077588
GI number: 170077588
Start: 995868
End: 996431
Strand: Direct
Name: 170077588
Synonym: SYNPCC7002_A0967
Alternate gene names: NA
Gene position: 995868-996431 (Clockwise)
Preceding gene: 170077587
Following gene: 170077589
Centisome position: 33.11
GC content: 49.47
Gene sequence:
>564_bases ATGGTTGCCAATGCAGTTCGCTGGACAGTACAGGATCTTGAAGCCATGCCCGACGATGGCGGCTGGAAACGCTATGAAAT TATTGATGGAGAATTAATCGTGACCCGCGCGCCCCATATTTTTCATCAAAGTGCTGCCAGTCGGCTCCATGTTGCCCTAG GTAATTGGTCAGACCAATCAGGTCTTGGTCGTGTTTTTGAGGCTCCAGGGGTGGTGTTCTCTCCGAATGATGGCGTGATT CCAGATGTGGTGTGGGTGAGCAATGCCCGTCTCGAAACGGGTGTGGATGAGTCGGGGCATTTTACCGTTGCGCCGGAACT GATGATCGAAATTCTCTCGGCGGGCAAACTAAATGAGCAGCGAGATAAAGAGGCAAAGCGTAAATTATATTCGCTCTATG GGGTGCAGGAATATTGGGTGGTGGATTGGCGACTGAAAACGATTGAAGTCTATCGGCGCAATCAGGCGCAGTTGGAGTTG GTCTGTACTTTACTGGGTGATGATGCTCTCACTTCACCTTTATTACCCGATTTTGCGATCGCCATTGATCAAGTTTTTCG TTAA
Upstream 100 bases:
>100_bases GCCCTGATTTTTGAGTTGCTATATTCTCAGCGCTGAGCAGTGGGCGATCGCTCCAGAAGACATCGACTACACTAAAAATA TCAATACTCCCAGGAAAACC
Downstream 100 bases:
>100_bases TCTCAACTATATCCATTGAAATTAGTGACAAAGAATTTAAACACTGTCATCAAAATATGCAGCATTTAGCTGAGGTTTTA TAAAATCATGATTGAAAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MVANAVRWTVQDLEAMPDDGGWKRYEIIDGELIVTRAPHIFHQSAASRLHVALGNWSDQSGLGRVFEAPGVVFSPNDGVI PDVVWVSNARLETGVDESGHFTVAPELMIEILSAGKLNEQRDKEAKRKLYSLYGVQEYWVVDWRLKTIEVYRRNQAQLEL VCTLLGDDALTSPLLPDFAIAIDQVFR
Sequences:
>Translated_187_residues MVANAVRWTVQDLEAMPDDGGWKRYEIIDGELIVTRAPHIFHQSAASRLHVALGNWSDQSGLGRVFEAPGVVFSPNDGVI PDVVWVSNARLETGVDESGHFTVAPELMIEILSAGKLNEQRDKEAKRKLYSLYGVQEYWVVDWRLKTIEVYRRNQAQLEL VCTLLGDDALTSPLLPDFAIAIDQVFR >Mature_187_residues MVANAVRWTVQDLEAMPDDGGWKRYEIIDGELIVTRAPHIFHQSAASRLHVALGNWSDQSGLGRVFEAPGVVFSPNDGVI PDVVWVSNARLETGVDESGHFTVAPELMIEILSAGKLNEQRDKEAKRKLYSLYGVQEYWVVDWRLKTIEVYRRNQAQLEL VCTLLGDDALTSPLLPDFAIAIDQVFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21021; Mature: 21021
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVANAVRWTVQDLEAMPDDGGWKRYEIIDGELIVTRAPHIFHQSAASRLHVALGNWSDQS CCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHEEEEEECCCCCCC GLGRVFEAPGVVFSPNDGVIPDVVWVSNARLETGVDESGHFTVAPELMIEILSAGKLNEQ CCCCEECCCCEEECCCCCCCCCEEEECCCEEECCCCCCCCEEECHHHHHHHHHCCCCCHH RDKEAKRKLYSLYGVQEYWVVDWRLKTIEVYRRNQAQLELVCTLLGDDALTSPLLPDFAI HHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCEEEHEEHHCCHHHCCCCCHHHHH AIDQVFR HHHHHCC >Mature Secondary Structure MVANAVRWTVQDLEAMPDDGGWKRYEIIDGELIVTRAPHIFHQSAASRLHVALGNWSDQS CCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHEEEEEECCCCCCC GLGRVFEAPGVVFSPNDGVIPDVVWVSNARLETGVDESGHFTVAPELMIEILSAGKLNEQ CCCCEECCCCEEECCCCCCCCCEEEECCCEEECCCCCCCCEEECHHHHHHHHHCCCCCHH RDKEAKRKLYSLYGVQEYWVVDWRLKTIEVYRRNQAQLELVCTLLGDDALTSPLLPDFAI HHHHHHHHHHHHHCCCEEEEEEEEEEEEEEECCCCCCEEEHEEHHCCHHHCCCCCHHHHH AIDQVFR HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA