Definition Synechococcus sp. PCC 7002 chromosome, complete genome.
Accession NC_010475
Length 3,008,047

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The map label for this gene is hflX [H]

Identifier: 170077566

GI number: 170077566

Start: 974542

End: 976146

Strand: Direct

Name: hflX [H]

Synonym: SYNPCC7002_A0944

Alternate gene names: 170077566

Gene position: 974542-976146 (Clockwise)

Preceding gene: 170077565

Following gene: 170077567

Centisome position: 32.4

GC content: 55.45

Gene sequence:

>1605_bases
GTGCCCGGCGATCGCCTCACGACTCCAGAATTAGCCCAACGGATCGCGGCCCTCAGTACAGAGCTAAACCAAGCGGTTTG
TGTTTATCTCAATCGCCGGGGCAAGGTGATCCGGGTGGGGGTTGGTTCGCCCCAACAAACCCAAATTCCCCCCCTAGAAT
TACCCCGTTATGGTGCCGAGCGCTTATCGGGTATCCGCTGCTTAACCGCCAGCCCGAAGGATGAACCGCCCAAGGAATCG
AGTTTAACGTCGATGGTGCTGCAACGGTTAGACGCCCTGGTGAGTTTTACGTTAACGGGGACGGGGACGACCAAACGGGG
CCGGGGGGCCGCTGGCTACGTAAAAAATGTCTATGTGGCTCACCTCTTGCCCCAGACCCATCCGAGCCATGCCTATTGGC
TTGTTTCTGAGTCTCAAGCCCTAGAAGAGGTTTCCCAACAGGATTTTTTGGATCTGGTTGAAGGACTAGAGGCGGAGTTT
CGCCGGGAATTCACGGCCCAACAAGTCGATCAAAGCCATGACCGGGTGATTCTCGTCGGCTTACAAACATCAGATATTGG
CGATCGCCCTTTCCAAGATCGTTTGACGGAACTGGCCCGCTTGGTGGATACTGCCGGGGGGGAAGTGCTGCTCACCCTGG
AGCAAAAACGCAGCACGCCCCATCCCCAAACCGTTGTCGGTACCGGGAAAGTAGAAGAAATTGCCCTCCAGGTACAAACC
CTTGGCGCGAATCTTGTGGTCTTTGACCGGGATCTATCTCCCGCCCAGGGGCGCAACCTGGAACGACAACTAGGGGTGAA
GGTTTGCGATCGCACGGAAGTAATCCTCGATATTTTTGCTCAGCGGGCCCAGTCTCGCGCCGGAAAACTCCAGGTGGAAC
TGGCGCAATTGGAGTATCTCTTGCCACGCTTGGTGGGTCGGGGTCAAGCCATGTCCCGTTTGGGGGGGGGGATCGGCACC
CGTGGCCCTGGGGAAACGAAATTAGAAACGGAGCGGCGCACGATCCAAAGTCGCCTCAGTCGCTTGCAAAAGGAAGTGGA
TCAACTGCAAGCCCACCGTTCGCGGATGCGCAGTCAGCGGCAACGGCAGGATGTGCCCACTTTTGCAATTGTCGGCTATA
CCAATGCGGGCAAATCGACCTTGATTAATGCCCTCACCAATGCTGAAGTGTATGCGGCGGATCAACTGTTCGCGACCCTC
GATCCCACGACGCGGCGCTTGACCCTCACCGATGAAGCCTTTCAAACCCAGACGATTCTACTAACGGATACCGTTGGTTT
TATCCATGAGTTGCCTCCGGCCCTGGTGGATGCGTTTCGGGCGACCCTCGAAGAAGTCACCGAAGCCGATGCATTGATCC
ATGTGGTGGATCTGTCCCATCCTGCGTGGCAGCATCAGTTAGAATCCGTCGAAAAAATTCTAGGGGAAATGCCGATTATG
CCAGCCCAAGCCCTATTGGTTTTTAATAAGCTGGATCAAGTTTCTAGTGAAGCACTCCAGGAGGCGAAGTTACGCCATCC
GAACGCGGTTTATATTTCTGCCAGCGATCGCCTCGGTTTTGAAACCCTCCGACAACGGCTTGCCCAGATGCTAAAACAAC
TATAA

Upstream 100 bases:

>100_bases
ATTTCGTTCTAGGAAGCTGCCCATCGATACTATTCACGGTAATCTCAAAGGTCTTAAAAGTAGTCAACTCAAGCAGTTGC
AACGACTGTATCAACAGGCT

Downstream 100 bases:

>100_bases
AGAGACAAATTTTCGCGAGATTGTAAACCAATTGTCAAAAAACTGCGAATTTCTCCCTTAGCGTAGAACACAACTCGTTA
AGCTTGAGATATGTCTACTA

Product: putative GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 534; Mature: 533

Protein sequence:

>534_residues
MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKES
SLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEF
RREFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT
LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGT
RGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATL
DPTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM
PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL

Sequences:

>Translated_534_residues
MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKES
SLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEF
RREFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT
LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGT
RGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATL
DPTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM
PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL
>Mature_533_residues
PGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAERLSGIRCLTASPKDEPPKESS
LTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVAHLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFR
REFTAQQVDQSHDRVILVGLQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQTL
GANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYLLPRLVGRGQAMSRLGGGIGTR
GPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQRQRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLD
PTTRRLTLTDEAFQTQTILLTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIMP
AQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL

Specific function: Unknown

COG id: COG2262

COG function: function code R; GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI310133118, Length=241, Percent_Identity=36.9294605809129, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI310133116, Length=231, Percent_Identity=37.6623376623377, Blast_Score=128, Evalue=1e-29,
Organism=Homo sapiens, GI310124269, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI310124267, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI310124171, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29,
Organism=Homo sapiens, GI310124169, Length=217, Percent_Identity=38.7096774193548, Blast_Score=128, Evalue=2e-29,
Organism=Escherichia coli, GI1790615, Length=346, Percent_Identity=47.1098265895954, Blast_Score=285, Evalue=4e-78,
Organism=Caenorhabditis elegans, GI17561038, Length=315, Percent_Identity=30.1587301587302, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24650079, Length=367, Percent_Identity=32.425068119891, Blast_Score=132, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR016496
- InterPro:   IPR006073
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 59184; Mature: 59053

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAE
CCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHH
RLSGIRCLTASPKDEPPKESSLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVA
HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHH
HLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFRREFTAQQVDQSHDRVILVG
HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT
EECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHH
LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYL
CCCEEEEEECCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
LPRLVGRGQAMSRLGGGIGTRGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQR
HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLDPTTRRLTLTDEAFQTQTIL
HHHCCCCEEEEEECCCCHHHHHHHHHCCHHEEHHHHHEECCCCCEEEEEECHHHCCEEEE
LTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCC
PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PGDRLTTPELAQRIAALSTELNQAVCVYLNRRGKVIRVGVGSPQQTQIPPLELPRYGAE
CCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCHH
RLSGIRCLTASPKDEPPKESSLTSMVLQRLDALVSFTLTGTGTTKRGRGAAGYVKNVYVA
HHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCHHHHHHHHH
HLLPQTHPSHAYWLVSESQALEEVSQQDFLDLVEGLEAEFRREFTAQQVDQSHDRVILVG
HHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
LQTSDIGDRPFQDRLTELARLVDTAGGEVLLTLEQKRSTPHPQTVVGTGKVEEIALQVQT
EECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHH
LGANLVVFDRDLSPAQGRNLERQLGVKVCDRTEVILDIFAQRAQSRAGKLQVELAQLEYL
CCCEEEEEECCCCCCCCCCCHHHHCCHHHCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHH
LPRLVGRGQAMSRLGGGIGTRGPGETKLETERRTIQSRLSRLQKEVDQLQAHRSRMRSQR
HHHHHCCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QRQDVPTFAIVGYTNAGKSTLINALTNAEVYAADQLFATLDPTTRRLTLTDEAFQTQTIL
HHHCCCCEEEEEECCCCHHHHHHHHHCCHHEEHHHHHEECCCCCEEEEEECHHHCCEEEE
LTDTVGFIHELPPALVDAFRATLEEVTEADALIHVVDLSHPAWQHQLESVEKILGEMPIM
EECCHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHHHHCCCCC
PAQALLVFNKLDQVSSEALQEAKLRHPNAVYISASDRLGFETLRQRLAQMLKQL
CHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8248183; 7610040; 9278503; 2020545; 3040675 [H]